RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 MAPRE3Q9UPY8 281 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 CLTCQ00610 1675 aaKnown RBP4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 UHRF1BP1Q6BDS2 1440 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 ZNF335Q9H4Z2 1342 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 PRXQ9BXM0 1461 aa4.69□□□□□ -1.66
HMGB1P6-201ENST00000569046 CAMSAP1Q5T5Y3 1602 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 ABCA6Q8N139 1617 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 PPM1GO15355 546 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 MAFO75444 373 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 FKBP9O95302 570 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 MASP1P48740 699 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 SCNN1BP51168 640 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 KPNA1P52294 538 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 ROM1Q03395 351 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 SURF1Q15526 300 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 PRAMEF9Q5VWM5 478 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 FKBP9P1Q75LS8 142 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 FILIP1Q7Z7B0 1213 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 STRA8Q7Z7C7 330 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 WDR48Q8TAF3 677 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 E2F7Q96AV8 911 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 GNRHR2Q96P88 292 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 TUBGCP5Q96RT8 1024 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 CHMP4AQ9BY43 222 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 POFUT1Q9H488 388 aa4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 MED1Q15648 1581 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P6-201ENST00000569046 DIP2CQ9Y2E4 1556 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 C9orf84Q5VXU9 1444 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 MATN2O00339 956 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 ELL2O00472 640 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 CANXP27824 592 aaKnown RBP4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 HSPA1LP34931 641 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 STAT3P40763 770 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 ID4P47928 161 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 LSSP48449 732 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 MRE11P49959 708 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 EGFLAMQ63HQ2 1017 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 KANSL1Q7Z3B3 1105 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 IFNL2Q8IZJ0 200 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 OR5AN1Q8NGI8 311 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 OR2W6PQ8NHA6 318 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 CFHR4Q92496 578 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 ZNF496Q96IT1 587 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 MYL10Q9BUA6 226 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 EMC7Q9NPA0 242 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 JADE2Q9NQC1 790 aa4.67□□□□□ -1.66
HMGB1P6-201ENST00000569046 PTPRTO14522 1441 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 NPEPPSL1A6NEC2 478 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 K7ESM1 405 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 PRPF6O94906 941 aaKnown RBP4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 BPIP17213 487 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 IL2P60568 153 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 EFEMP1Q12805 493 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 LRRC32Q14392 662 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 ICAM4Q14773 271 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 ACAP1Q15027 740 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 ZMAT1Q5H9K5 638 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 AGBL4Q5VU57 503 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 SLFN13Q68D06 897 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 GLB1LQ6UWU2 654 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 NME9Q86XW9 330 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 NEIL1Q96FI4 390 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 SCYL1Q96KG9 808 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 LRRC37BQ96QE4 947 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 LMF1Q96S06 567 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 SEC61A2Q9H9S3 476 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 MAGI2Q86UL8 1455 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 ITSN2Q9NZM3 1697 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 ARHGAP5Q13017 1502 aa4.66□□□□□ -1.66
HMGB1P6-201ENST00000569046 KIDINS220Q9ULH0 1771 aa4.65□□□□□ -1.66
HMGB1P6-201ENST00000569046 PLCH2O75038 1416 aa4.65□□□□□ -1.66
HMGB1P6-201ENST00000569046 NEMP1O14524 444 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 ARHGAP6O43182 974 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 APOL3O95236 402 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 PHC1P78364 1004 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 NFKB2Q00653 900 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 HGFACQ04756 655 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 ADCY2Q08462 1091 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 ADCY1Q08828 1119 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 ADAM15Q13444 863 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 SART3Q15020 963 aaKnown RBP4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 DHCR24Q15392 516 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 TERF2Q15554 542 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZBTB41Q5SVQ8 909 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 EFCAB2Q5VUJ9 269 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 ERICH6BQ5W0A0 696 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 USP30Q70CQ3 517 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 PRRT2Q7Z6L0 340 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 PHYKPLQ8IUZ5 450 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZZZ3Q8IYH5 903 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 RTKN2Q8IZC4 609 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 C7orf31Q8N865 590 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 ZNF610Q8N9Z0 462 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 DNERQ8NFT8 737 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 OR14K1Q8NGZ2 314 aa4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 NKD2Q969F2 451 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P6-201ENST00000569046 LOXL4Q96JB6 756 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms