RNA–Protein interactions for RNA: ENST00000568945.2

MKRN3-204, Transcript of makorin ring finger protein 3, human

TSL 4

Gene MKRN3, Length 2,740 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKRN3-204	ENST00000568945	LLPH	Q9BRT6	129 aa	Known RBP	10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	RHOBTB2	Q9BYZ6	727 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	PARVB	Q9HBI1	364 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	PCDHB6	Q9Y5E3	794 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	C16orf96	A6NNT2	1141 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	SFI1	A8K8P3	1242 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	ALDH1A2	O94788	518 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	APOE	P02649	317 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CFL1	P23528	166 aa	Known RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	IFNAR2	P48551	515 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	SEPT6	Q14141	434 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	ZNF124	Q15973	351 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	ANO4	Q32M45	955 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	SLC6A19	Q695T7	634 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	AGMO	Q6ZNB7	445 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	TTLL7	Q6ZT98	887 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	SLC4A11	Q8NBS3	891 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	GFM2	Q969S9	779 aa	Known RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CDCA5	Q96FF9	252 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	SLC47A1	Q96FL8	570 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	RMDN3	Q96TC7	470 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	TSR3	Q9UJK0	312 aa	Known RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	EXOC6B	Q9Y2D4	811 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	ZBTB1	Q9Y2K1	713 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CDK2AP1	O14519	115 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	GPR37L1	O60883	481 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CYP11A1	P05108	521 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CSF2RA	P15509	400 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	SSTR3	P32745	418 aa	Predicted RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	PPP1R2	P41236	205 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	EIF4A1	P60842	406 aa	Known RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	SST	P61278	116 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CSNK2B	P67870	215 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CYP4F8	P98187	520 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CENPC	Q03188	943 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	KRT32	Q14532	448 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	PABPC1L	Q4VXU2	614 aa	Known RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	SNX30	Q5VWJ9	437 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	PPP1R2P3	Q6NXS1	205 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	THNSL2	Q86YJ6	484 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	ZNF454	Q8N9F8	522 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	LILRB4	Q8NHJ6	448 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	FAM149B1	Q96BN6	582 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	TMEM237	Q96Q45	408 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	DACT1	Q9NYF0	836 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	ATXN10	Q9UBB4	475 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CIDEB	Q9UHD4	219 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	ADAMTS1	Q9UHI8	967 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	RAPGEF6	Q8TEU7	1601 aa		10.82	□□□□□ -0.68
MKRN3-204	ENST00000568945	NAIP	Q13075	1403 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	ECD	O95905	644 aa	Predicted RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	HLA-DRA	P01903	254 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	KCNC4	Q03721	635 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	E2F2	Q14209	437 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	SLC27A3	Q5K4L6	730 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	RGS9BP	Q6ZS82	235 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	ANKS3	Q6ZW76	656 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	GAS2L3	Q86XJ1	694 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	PLPP7	Q8NBV4	271 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	CCT6B	Q92526	530 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	EMID1	Q96A84	441 aa	Predicted RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	FERMT2	Q96AC1	680 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	COQ7	Q99807	217 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	USP26	Q9BXU7	913 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	INTS2	Q9H0H0	1204 aa	Known RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	SPTLC3	Q9NUV7	552 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	ANO10	Q9NW15	660 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	DSE	Q9UL01	958 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	WDR19	Q8NEZ3	1342 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	PSD	A5PKW4	1024 aa	Predicted RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	GOLGA8S	H3BPF8	625 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	STX16-NPEPL1	H3BU86	382 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	IKBKB	O14920	756 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	WDR46	O15213	610 aa	Known RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	CCNT1	O60563	726 aa	Known RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	ICMT	O60725	284 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	CYP2A6	P11509	494 aa	Predicted RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	ODF1	Q14990	250 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	MOG	Q16653	247 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	MINDY4	Q4G0A6	757 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	OR52K1	Q8NGK4	314 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	BSND	Q8WZ55	320 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	IRGQ	Q8WZA9	623 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	SMARCE1	Q969G3	411 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	TTC17	Q96AE7	1141 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	NT5C3A	Q9H0P0	336 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	ESF1	Q9H501	851 aa	Known RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	SRA1	Q9HD15	236 aa	Known RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	CCDC177	Q9NQR7	707 aa	Predicted RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	ST7	Q9NRC1	585 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	IARS2	Q9NSE4	1012 aa	Known RBP	10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	SLC39A1	Q9NY26	324 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	KCNH4	Q9UQ05	1017 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	NUP160	Q12769	1436 aa		10.81	□□□□□ -0.68
MKRN3-204	ENST00000568945	AREL1	O15033	823 aa		10.8	□□□□□ -0.68
MKRN3-204	ENST00000568945	SEC31A	O94979	1220 aa	Known RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms