RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, human

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAPC5-208	ENST00000568875	ZNF397	Q8NF99	534 aa	Predicted RBP	12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	DBF4B	Q8NFT6	615 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	ETNPPL	Q8TBG4	499 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	ATP8B4	Q8TF62	1192 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	ZBTB10	Q96DT7	871 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	CDX2	Q99626	313 aa	Predicted RBP	12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	ZNF576	Q9H609	170 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	MSRA	Q9UJ68	235 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	TRPC6	Q9Y210	931 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	STXBP5L	Q9Y2K9	1186 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	YBX2	Q9Y2T7	364 aa	Known RBP	12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	NFE2L3	Q9Y4A8	694 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	PCDHA2	Q9Y5H9	948 aa		12.84	□□□□□ -0.35
SNAPC5-208	ENST00000568875	UNC80	Q8N2C7	3258 aa		12.83	□□□□□ -0.35
SNAPC5-208	ENST00000568875	ZBTB42	B2RXF5	422 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	GAS7	O60861	476 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	PSAP	P07602	524 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	CTSH	P09668	335 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	WDR5	P61964	334 aa	Known RBP	12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	ATP2C1	P98194	919 aa	Predicted RBP	12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	MGAT3	Q09327	533 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	MKRN4P	Q13434	485 aa	Predicted RBP	12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	IKBKE	Q14164	716 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	LETM2	Q2VYF4	491 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	LRCH2	Q5VUJ6	765 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SPATA1	Q5VX52	437 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	PIK3AP1	Q6ZUJ8	805 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	NEK8	Q86SG6	692 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	TRAPPC12	Q8WVT3	735 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	DNAJB3	Q8WWF6	145 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SLC9A7	Q96T83	725 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	UNC45A	Q9H3U1	944 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	DISC1	Q9NRI5	854 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	DDX25	Q9UHL0	483 aa	Known RBP	12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	PCDHA11	Q9Y5I1	949 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875	TRANK1	O15050	2925 aa		12.83	□□□□□ -0.36
SNAPC5-208	ENST00000568875		A0A1B0GTH6	734 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	WDR64	B1ANS9	1081 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SLC37A4	O43826	429 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	MYOG	P15173	224 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	CDK11B	P21127	795 aa	Known RBP	12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	GRIN2C	Q14957	1233 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	NR1I3	Q14994	352 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	ZNF484	Q5JVG2	852 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SPECC1	Q5M775	1068 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	MTHFD1L	Q6UB35	978 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	RSPH3	Q86UC2	560 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	TMEM139	Q8IV31	216 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	HERC6	Q8IVU3	1022 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	TEKT3	Q9BXF9	490 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	INTS13	Q9NVM9	706 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	GABBR1	Q9UBS5	961 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SAMM50	Q9Y512	469 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	WDR81	Q562E7	1941 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SMIM35	A0A1B0GVV1	85 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	FAM205C	A6NFA0	338 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	ZNF862	O60290	1169 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	EFCAB14	O75071	495 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	RPLP2	P05387	115 aa	Known RBP	12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	PRR29	P0C7W0	189 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	GCFC2	P16383	781 aa	Known RBP	12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	KLRC1	P26715	233 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SFN	P31947	248 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	TTC38	Q5R3I4	469 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	REXO1L1P	Q8IX06	675 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	BBX	Q8WY36	941 aa	Predicted RBP	12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	GBF1	Q92538	1859 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	PAGE5	Q96GU1	130 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	FAM20A	Q96MK3	541 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	NKX2-4	Q9H2Z4	354 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	KCNMB3	Q9NPA1	279 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	TCEAL9	Q9UHQ7	104 aa		12.82	□□□□□ -0.36
SNAPC5-208	ENST00000568875	EVPL	Q92817	2033 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	COL1A2	P08123	1366 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	IGSF9B	Q9UPX0	1349 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	CCNT1	O60563	726 aa	Known RBP	12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	JAK3	P52333	1124 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	DEFB103A	P81534	67 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	DPYD	Q12882	1025 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	TRIM65	Q6PJ69	517 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SYT10	Q6XYQ8	523 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	NME8	Q8N427	588 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	IQUB	Q8NA54	791 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	RDM1	Q8NG50	284 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SEPT8	Q92599	483 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	HAS1	Q92839	578 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	PANX2	Q96RD6	677 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	BAG1	Q99933	345 aa	Predicted RBP	12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	NAA15	Q9BXJ9	866 aa	Known RBP	12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	GTPBP4	Q9BZE4	634 aa	Known RBP	12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	SLC28A3	Q9HAS3	691 aa		12.81	□□□□□ -0.36
SNAPC5-208	ENST00000568875	CHMP2A	O43633	222 aa		12.8	□□□□□ -0.36
SNAPC5-208	ENST00000568875	MRPS6	P82932	125 aa	Known RBP	12.8	□□□□□ -0.36
SNAPC5-208	ENST00000568875	CUL4B	Q13620	913 aa		12.8	□□□□□ -0.36
SNAPC5-208	ENST00000568875	LPIN1	Q14693	890 aa		12.8	□□□□□ -0.36
SNAPC5-208	ENST00000568875	IER5	Q5VY09	327 aa		12.8	□□□□□ -0.36
SNAPC5-208	ENST00000568875	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
SNAPC5-208	ENST00000568875	USP49	Q70CQ1	688 aa		12.8	□□□□□ -0.36
SNAPC5-208	ENST00000568875	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.8	□□□□□ -0.36

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