RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 TTC38Q5R3I4 469 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 ZNF598Q86UK7 904 aaKnown RBP32.81■■■□□ 2.84
RAB40C-211ENST00000568586 ECHDC2Q86YB7 292 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 C4orf32Q8N8J7 132 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 TCP11Q8WWU5 503 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 PSPC1Q8WXF1 523 aaKnown RBP32.81■■■□□ 2.84
RAB40C-211ENST00000568586 RNF19AQ9NV58 838 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 DACT1Q9NYF0 836 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 PLAGL2Q9UPG8 496 aa32.81■■■□□ 2.84
RAB40C-211ENST00000568586 FNDC1Q4ZHG4 1894 aaPredicted RBP32.8■■■□□ 2.84
RAB40C-211ENST00000568586 POTEMA6NI47 508 aa32.8■■■□□ 2.84
RAB40C-211ENST00000568586 ASAP2O43150 1006 aa32.8■■■□□ 2.84
RAB40C-211ENST00000568586 OR52Z1P0C646 297 aa32.8■■■□□ 2.84
RAB40C-211ENST00000568586 BMP1P13497 986 aa32.8■■■□□ 2.84
RAB40C-211ENST00000568586 COL19A1Q14993 1142 aa32.8■■■□□ 2.84
RAB40C-211ENST00000568586 TMEM143Q96AN5 459 aa32.8■■■□□ 2.84
RAB40C-211ENST00000568586 XPNPEP1Q9NQW7 623 aa32.8■■■□□ 2.84
RAB40C-211ENST00000568586 MYO7AQ13402 2215 aa32.79■■■□□ 2.84
RAB40C-211ENST00000568586 BDP1A6H8Y1 2624 aa32.79■■■□□ 2.84
RAB40C-211ENST00000568586 HOXA2O43364 376 aa32.79■■■□□ 2.84
RAB40C-211ENST00000568586 EOMESO95936 686 aa32.79■■■□□ 2.84
RAB40C-211ENST00000568586 LAMTOR4Q0VGL1 99 aa32.79■■■□□ 2.84
RAB40C-211ENST00000568586 NLRP4Q96MN2 994 aa32.79■■■□□ 2.84
RAB40C-211ENST00000568586 TMEM117Q9H0C3 514 aa32.79■■■□□ 2.84
RAB40C-211ENST00000568586 TUFT1Q9NNX1 390 aa32.79■■■□□ 2.84
RAB40C-211ENST00000568586 NOL7Q9UMY1 257 aaKnown RBP32.79■■■□□ 2.84
RAB40C-211ENST00000568586 TBKBP1A7MCY6 615 aa32.78■■■□□ 2.84
RAB40C-211ENST00000568586 FGFR1P11362 822 aa32.78■■■□□ 2.84
RAB40C-211ENST00000568586 TOB1P50616 345 aaPredicted RBP32.78■■■□□ 2.84
RAB40C-211ENST00000568586 GNL2Q13823 731 aaKnown RBP32.78■■■□□ 2.84
RAB40C-211ENST00000568586 CAMK1Q14012 370 aa32.78■■■□□ 2.84
RAB40C-211ENST00000568586 SRGAP1Q7Z6B7 1085 aa32.78■■■□□ 2.84
RAB40C-211ENST00000568586 FERMT3Q86UX7 667 aa32.78■■■□□ 2.84
RAB40C-211ENST00000568586 POLR3CQ9BUI4 534 aaPredicted RBP32.78■■■□□ 2.84
RAB40C-211ENST00000568586 NSUN3Q9H649 340 aaKnown RBP32.78■■■□□ 2.84
RAB40C-211ENST00000568586 DGAT1O75907 488 aa32.77■■■□□ 2.84
RAB40C-211ENST00000568586 RARRES1P49788 294 aa32.77■■■□□ 2.84
RAB40C-211ENST00000568586 CATSPER3Q86XQ3 398 aa32.77■■■□□ 2.84
RAB40C-211ENST00000568586 SPPL3Q8TCT6 385 aa32.77■■■□□ 2.84
RAB40C-211ENST00000568586 CASD1Q96PB1 797 aa32.77■■■□□ 2.84
RAB40C-211ENST00000568586 MTRQ99707 1265 aa32.77■■■□□ 2.84
RAB40C-211ENST00000568586 ARID2Q68CP9 1835 aa32.77■■■□□ 2.84
RAB40C-211ENST00000568586 ITGB1P05556 798 aa32.76■■■□□ 2.83
RAB40C-211ENST00000568586 ATF7P17544 494 aaPredicted RBP32.76■■■□□ 2.83
RAB40C-211ENST00000568586 TECP42680 631 aa32.76■■■□□ 2.83
RAB40C-211ENST00000568586 POU5F1BQ06416 359 aa32.76■■■□□ 2.83
RAB40C-211ENST00000568586 KLHL23Q8NBE8 558 aa32.76■■■□□ 2.83
RAB40C-211ENST00000568586 TYW1Q9NV66 732 aaKnown RBP32.76■■■□□ 2.83
RAB40C-211ENST00000568586 KIAA1671Q9BY89 1806 aa32.76■■■□□ 2.83
RAB40C-211ENST00000568586 IBSPP21815 317 aaPredicted RBP32.75■■■□□ 2.83
RAB40C-211ENST00000568586 FXR2P51116 673 aaKnown RBP eCLIP32.75■■■□□ 2.83
RAB40C-211ENST00000568586 MXD4Q14582 209 aaPredicted RBP32.75■■■□□ 2.83
RAB40C-211ENST00000568586 CWH43Q9H720 699 aa32.75■■■□□ 2.83
RAB40C-211ENST00000568586 UBE2ZQ9H832 354 aaPredicted RBP32.75■■■□□ 2.83
RAB40C-211ENST00000568586 ALG13Q9NP73 1137 aaKnown RBP32.75■■■□□ 2.83
RAB40C-211ENST00000568586 AAASQ9NRG9 546 aa32.75■■■□□ 2.83
RAB40C-211ENST00000568586 ZNF623O75123 536 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 MED24O75448 989 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 SRGAP2CP0DJJ0 459 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 RPA1P27694 616 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 ARL2P36404 184 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 PHKA2P46019 1235 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 TCEAL5Q5H9L2 206 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 CATSPER4Q7RTX7 472 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 IFNLR1Q8IU57 520 aaPredicted RBP32.74■■■□□ 2.83
RAB40C-211ENST00000568586 PIGOQ8TEQ8 1089 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 RSPH1Q8WYR4 309 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 MINDY3Q9H8M7 445 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 AGPAT5Q9NUQ2 364 aa32.74■■■□□ 2.83
RAB40C-211ENST00000568586 DBR1Q9UK59 544 aaKnown RBP32.74■■■□□ 2.83
RAB40C-211ENST00000568586 MUTP22033 750 aa32.73■■■□□ 2.83
RAB40C-211ENST00000568586 DNAJB1P25685 340 aa32.73■■■□□ 2.83
RAB40C-211ENST00000568586 KCNQ1P51787 676 aa32.73■■■□□ 2.83
RAB40C-211ENST00000568586 PCBP1Q15365 356 aaKnown RBP eCLIP32.73■■■□□ 2.83
RAB40C-211ENST00000568586 CSPP1Q1MSJ5 1256 aa32.73■■■□□ 2.83
RAB40C-211ENST00000568586 CLLU1OSQ5K130 101 aa32.73■■■□□ 2.83
RAB40C-211ENST00000568586 LRRC55Q6ZSA7 311 aa32.73■■■□□ 2.83
RAB40C-211ENST00000568586 NACC1Q96RE7 527 aa32.73■■■□□ 2.83
RAB40C-211ENST00000568586 BMP2KQ9NSY1 1161 aaPredicted RBP32.73■■■□□ 2.83
RAB40C-211ENST00000568586 PCDHB12Q9Y5F1 795 aa32.73■■■□□ 2.83
RAB40C-211ENST00000568586 SKIP12755 728 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 GJB2P29033 226 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 PTENP60484 403 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 UBE3AQ05086 875 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 PDIA5Q14554 519 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 NBR1Q14596 966 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 RNF149Q8NC42 400 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 ERMNQ8TAM6 284 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 ADAMTS19Q8TE59 1207 aa32.72■■■□□ 2.83
RAB40C-211ENST00000568586 PIN4Q9Y237 131 aaKnown RBP32.72■■■□□ 2.83
RAB40C-211ENST00000568586 NCK2O43639 380 aa32.71■■■□□ 2.83
RAB40C-211ENST00000568586 HOXA11P31270 313 aaPredicted RBP32.71■■■□□ 2.83
RAB40C-211ENST00000568586 PABPC5Q96DU9 382 aaKnown RBP32.71■■■□□ 2.83
RAB40C-211ENST00000568586 NFKBIZQ9BYH8 718 aa32.71■■■□□ 2.83
RAB40C-211ENST00000568586 BACH2Q9BYV9 841 aa32.71■■■□□ 2.83
RAB40C-211ENST00000568586 HCSTQ9UBK5 93 aa32.71■■■□□ 2.83
RAB40C-211ENST00000568586 PCDHB6Q9Y5E3 794 aa32.71■■■□□ 2.83
RAB40C-211ENST00000568586 LAD1O00515 517 aa32.7■■■□□ 2.83
RAB40C-211ENST00000568586 LAG3P18627 525 aa32.7■■■□□ 2.83
RAB40C-211ENST00000568586 RAB27AP51159 221 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms