RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 SAMM50Q9Y512 469 aa9.56□□□□□ -0.88
KLHDC4-220ENST00000568338 WDR81Q562E7 1941 aa9.56□□□□□ -0.88
KLHDC4-220ENST00000568338 GRIN2DO15399 1336 aa9.56□□□□□ -0.88
KLHDC4-220ENST00000568338 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 DKC1O60832 514 aaKnown RBP eCLIP9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 BAIAP3O94812 1187 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 SMC2O95347 1197 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 CCNE2O96020 404 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 P4HBP07237 508 aaKnown RBP9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 PSAPP07602 524 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 SPATA31C1P0DKV0 1188 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 CYP2C9P11712 490 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 AFMP43652 599 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 CYP4A11Q02928 519 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 ECM1Q16610 540 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 TSR1Q2NL82 804 aaKnown RBP9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 MIS18BP1Q6P0N0 1132 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 METTL7BQ6UX53 244 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 SV2BQ7L1I2 683 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 CYFIP1Q7L576 1253 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 GRAMD1CQ8IYS0 662 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 RETREG2Q8NC44 543 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 SMARCE1Q969G3 411 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 VWCEQ96DN2 955 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 PRRX2Q99811 253 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 HSD17B14Q9BPX1 270 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 LXNQ9BS40 222 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 LRRC27Q9C0I9 530 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 BLOC1S4Q9NUP1 217 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 RGL1Q9NZL6 768 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 DDX41Q9UJV9 622 aaKnown RBP9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 DNM3Q9UQ16 869 aa9.55□□□□□ -0.88
KLHDC4-220ENST00000568338 RBM47A0AV96 593 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 DYNC1LI2O43237 492 aaPredicted RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 MAP3K7O43318 606 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 GFRA3O60609 400 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 SLITRK3O94933 977 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 ARIH2O95376 493 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 GGPS1O95749 300 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 TXNP10599 105 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 QARSP47897 775 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 ACTR2P61160 394 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 PSMC5P62195 406 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 SP2Q02086 613 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 SP4Q02446 784 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 TYRO3Q06418 890 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 DPYDQ12882 1025 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 CTTNQ14247 550 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 MCM6Q14566 821 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 STX1AQ16623 288 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 LY6KQ17RY6 165 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 CELF3Q5SZQ8 465 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 NT5DC1Q5TFE4 455 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 TAPT1Q6NXT6 567 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 CCDC62Q6P9F0 684 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 KCNK18Q7Z418 384 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 SPRED2Q7Z698 418 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 TPH2Q8IWU9 490 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 BANK1Q8NDB2 785 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 LRRC15Q8TF66 581 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 ERCC4Q92889 916 aaPredicted RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 ATP6V0A1Q93050 837 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 GSDMAQ96QA5 445 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 NACC1Q96RE7 527 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 TGS1Q96RS0 853 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 FUCA2Q9BTY2 467 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 KATNBL1Q9H079 304 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 TSPY26PQ9H489 355 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 ZSWIM4Q9H7M6 989 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 MLXIPQ9HAP2 919 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 TRMT13Q9NUP7 481 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 PRKAG3Q9UGI9 489 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 TUBE1Q9UJT0 475 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 PCDHA10Q9Y5I2 948 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 IGSF9BQ9UPX0 1349 aa9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 MYH9P35579 1960 aaKnown RBP9.54□□□□□ -0.88
KLHDC4-220ENST00000568338 LCHNA4D1U4 455 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 E9PMD0 336 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 H3BQ06 376 aaPredicted RBP9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 NKRFO15226 690 aaKnown RBP eCLIP9.53□□□□□ -0.881e-11■■■■■ 43.4
KLHDC4-220ENST00000568338 SORBS3O60504 671 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 LYPLA2O95372 231 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 EYA4O95677 639 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 GH1P01241 217 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 PLA2G4BP0C869 781 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 ZP2Q05996 745 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 DHX8Q14562 1220 aaKnown RBP9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 FAM47CQ5HY64 1035 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 ABHD15Q6UXT9 468 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 EP400NLQ6ZTU2 488 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 C4orf19Q8IY42 314 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 TRIML1Q8N9V2 468 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 PRSS33Q8NF86 280 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 SPATA20Q8TB22 786 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 STAMQ92783 540 aa9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 CCDC47Q96A33 483 aaKnown RBP9.53□□□□□ -0.88
KLHDC4-220ENST00000568338 MTRQ99707 1265 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms