RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SLC9A1P19634 815 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 NCKAP1LP55160 1127 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 EXOC3L4Q17RC7 722 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 ARHGAP29Q52LW3 1261 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 FIGNQ5HY92 759 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 WDR59Q6PJI9 974 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 TMEM161BQ8NDZ6 487 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 SLC35C1Q96A29 364 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 GPR20Q99678 358 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 STRA6Q9BX79 667 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 DEF6Q9H4E7 631 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 EXOC7Q9UPT5 735 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 TRPC6Q9Y210 931 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 USP20Q9Y2K6 914 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 A0A0U1RQJ8 604 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 IGF2BP3O00425 579 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMG1-215ENST00000568239 HNRNPDLO14979 420 aaKnown RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 KRT13P13646 458 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 ADCYAP1R1P41586 468 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 CHMP4BP1P59074 171 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 GNG11P61952 73 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 FAM110CQ1W6H9 321 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 ZNF792Q3KQV3 632 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 TDRD12Q587J7 1177 aaKnown RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 PLEKHH3Q7Z736 793 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 SLC17A8Q8NDX2 589 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 ATRIPQ8WXE1 791 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 SAAL1Q96ER3 474 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 CCDC42Q96M95 316 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 KCND1Q9NSA2 647 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 HSPBP1Q9NZL4 362 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 GCNT4Q9P109 453 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 MORF4L1Q9UBU8 362 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 ZHX1Q9UKY1 873 aaPredicted RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 ABT1Q9ULW3 272 aaKnown RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 EPN1Q9Y6I3 576 aaPredicted RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 ADGRA3Q8IWK6 1321 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 PLXNB2O15031 1838 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 IGKV6D-21A0A0A0MT36 114 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 A0A1W2PQJ5 194 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 KIF2AO00139 706 aaPredicted RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 NDUFA10O95299 355 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 PLEKP08567 350 aaPredicted RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 CNGA1P29973 690 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 PPP2R3AQ06190 1150 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 PDE4CQ08493 712 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 MKRN4PQ13434 485 aaPredicted RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 RAPGEF1Q13905 1077 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 RGMBQ6NW40 437 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 CCDC62Q6P9F0 684 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMG1-215ENST00000568239 SAPCD2Q86UD0 394 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 RASAL3Q86YV0 1011 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 XXYLT1Q8NBI6 393 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 ZSWIM2Q8NEG5 633 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 DEPTORQ8TB45 409 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 POMGNT1Q8WZA1 660 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 SPAG5Q96R06 1193 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 IRX2Q9BZI1 471 aaPredicted RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 NHEJ1Q9H9Q4 299 aaPredicted RBP7.72□□□□□ -1.17
SMG1-215ENST00000568239 C17orf75Q9HAS0 396 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 PLXNA1Q9UIW2 1896 aa7.72□□□□□ -1.17
SMG1-215ENST00000568239 UQCRHLA0A096LP55 91 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 GOLGA6L9A6NEM1 432 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 ANKRD63C9JTQ0 380 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 UQCRHP07919 91 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 MAPK4P31152 587 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 CYLC1P35663 651 aaPredicted RBP7.71□□□□□ -1.17
SMG1-215ENST00000568239 MATR3P43243 847 aaKnown RBP eCLIP7.71□□□□□ -1.17
SMG1-215ENST00000568239 ETF1P62495 437 aaKnown RBP7.71□□□□□ -1.17
SMG1-215ENST00000568239 IGBP1P78318 339 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 CYP27A1Q02318 531 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 BFSP1Q12934 665 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 GBP6Q6ZN66 633 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 LRRC71Q8N4P6 559 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 TRAPPC12Q8WVT3 735 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 CCDC127Q96BQ5 260 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 IQCDQ96DY2 449 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 ZNF668Q96K58 619 aaPredicted RBP7.71□□□□□ -1.17
SMG1-215ENST00000568239 MKNK1Q9BUB5 465 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 DHX33Q9H6R0 707 aaKnown RBP7.71□□□□□ -1.17
SMG1-215ENST00000568239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.71□□□□□ -1.17
SMG1-215ENST00000568239 PDLIM7Q9NR12 457 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 DMAC2Q9NW81 257 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 CEP72Q9P209 647 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 PLAGL2Q9UPG8 496 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 PAXBP1Q9Y5B6 917 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 ARID2Q68CP9 1835 aa7.71□□□□□ -1.17
SMG1-215ENST00000568239 K7ERI5 159 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 RIOK3O14730 519 aaKnown RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 AKR1B10O60218 316 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 NOL4O94818 638 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 PON1P27169 355 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 LIG4P49917 911 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 STRN3Q13033 797 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 DRP2Q13474 957 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 KIAA1328Q86T90 577 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 IFNLR1Q8IU57 520 aaPredicted RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 MAP4K3Q8IVH8 894 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms