RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 TXLNAP40222 546 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 TFDP1Q14186 410 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 DHX8Q14562 1220 aaKnown RBP14.12□□□□□ -0.15
GINS3-209ENST00000567909 MXD4Q14582 209 aaPredicted RBP14.12□□□□□ -0.15
GINS3-209ENST00000567909 TMEM119Q4V9L6 283 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 ATL3Q6DD88 541 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 HERC6Q8IVU3 1022 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 LINC01599Q8WXQ3 324 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 FTHL17Q9BXU8 183 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 PBX4Q9BYU1 374 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 CCSER1Q9C0I3 900 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 MSRAQ9UJ68 235 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 MORC2Q9Y6X9 1032 aaPredicted RBP14.12□□□□□ -0.15
GINS3-209ENST00000567909 SLC26A4O43511 780 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 TLL1O43897 1013 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 MGEA5O60502 916 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 PLA2G4BP0C869 781 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 MYOGP15173 224 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 GLRA2P23416 452 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 DNAJB2P25686 324 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 PHKA2P46019 1235 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 CAPSQ13938 189 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 CATSPER4Q7RTX7 472 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 RTN4RL1Q86UN2 441 aaPredicted RBP14.11□□□□□ -0.15
GINS3-209ENST00000567909 KCNG4Q8TDN1 519 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 ADAM2Q99965 735 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 RUSC1Q9BVN2 902 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 PANK2Q9BZ23 570 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 INO80BQ9C086 356 aaPredicted RBP14.11□□□□□ -0.15
GINS3-209ENST00000567909 IFT122Q9HBG6 1241 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 CCDC39Q9UFE4 941 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 ATP6V1DQ9Y5K8 247 aa14.11□□□□□ -0.15
GINS3-209ENST00000567909 LRRIQ4A6NIV6 560 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 CUTAO60888 179 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
GINS3-209ENST00000567909 ME1P48163 572 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 KRT85P78386 507 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 NUCB2P80303 420 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 RAD51AP2Q09MP3 1159 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 MCM6Q14566 821 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 RAB30Q15771 203 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 RINT1Q6NUQ1 792 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 SYT2Q8N9I0 419 aaPredicted RBP14.1□□□□□ -0.15
GINS3-209ENST00000567909 LRRC15Q8TF66 581 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 TIFAQ96CG3 184 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 TSPYL2Q9H2G4 693 aaPredicted RBP14.1□□□□□ -0.15
GINS3-209ENST00000567909 NKX2-4Q9H2Z4 354 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 MINDY3Q9H8M7 445 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 YBX2Q9Y2T7 364 aaKnown RBP14.1□□□□□ -0.15
GINS3-209ENST00000567909 PCDHA11Q9Y5I1 949 aa14.1□□□□□ -0.15
GINS3-209ENST00000567909 CHD9Q3L8U1 2897 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 SZT2Q5T011 3432 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 INO80B-WBP1J3KQ70 363 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 HIP1RO75146 1068 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 GJB5O95377 273 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 ZSCAN20P17040 1043 aaPredicted RBP14.09□□□□□ -0.15
GINS3-209ENST00000567909 SLC12A3P55017 1021 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 PTENP60484 403 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 RRAGBQ5VZM2 374 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 C1orf186Q6ZWK4 172 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 SRGAP1Q7Z6B7 1085 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 KCTD17Q8N5Z5 321 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 BSNDQ8WZ55 320 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 RAD54LQ92698 747 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 KIFAP3Q92845 792 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 TOP1MTQ969P6 601 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 IFT74Q96LB3 600 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 FAM161BQ96MY7 647 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 BLOC1S4Q9NUP1 217 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 RCOR1Q9UKL0 485 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 PCDHA7Q9UN72 937 aa14.09□□□□□ -0.15
GINS3-209ENST00000567909 NPHP3-ACAD11A0A0J9YXS1 232 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 ERLIN2O94905 339 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 KRT18P05783 430 aaKnown RBP14.08□□□□□ -0.16
GINS3-209ENST00000567909 DDIT3P35638 169 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 DSC3Q14574 896 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 PPP2R5AQ15172 486 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 ZNF697Q5TEC3 545 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 Q7L0L9 218 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 GPBP1Q86WP2 473 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 ZBTB8OSQ8IWT0 167 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 PDILTQ8N807 584 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 DEPTORQ8TB45 409 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 LEO1Q8WVC0 666 aaPredicted RBP14.08□□□□□ -0.16
GINS3-209ENST00000567909 LARP4BQ92615 738 aaKnown RBP14.08□□□□□ -0.16
GINS3-209ENST00000567909 DRC1Q96MC2 740 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 YME1L1Q96TA2 773 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 RAD9AQ99638 391 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 RGS18Q9NS28 235 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 C1orf112Q9NSG2 853 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 LRFN2Q9ULH4 789 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 PIN4Q9Y237 131 aaKnown RBP14.08□□□□□ -0.16
GINS3-209ENST00000567909 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.16
GINS3-209ENST00000567909 NLRC5Q86WI3 1866 aa14.08□□□□□ -0.16
GINS3-209ENST00000567909 A0A087X0B3 334 aa14.07□□□□□ -0.16
GINS3-209ENST00000567909 LCHNA4D1U4 455 aa14.07□□□□□ -0.16
GINS3-209ENST00000567909 CCDC169A6NNP5 214 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms