RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 BMP15O95972 392 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 B3GALT4O96024 378 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 ASNSP08243 561 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 OR52Z1P0C646 297 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 ARL4DP49703 201 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 STAT2P52630 851 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 CCDC173Q0VFZ6 552 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 IKQ13123 557 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-210ENST00000567654 TNFAIP1Q13829 316 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 SUZ12Q15022 739 aaKnown RBP6.47□□□□□ -1.37
SF3B3-210ENST00000567654 KARSQ15046 597 aaKnown RBP6.47□□□□□ -1.37
SF3B3-210ENST00000567654 UVSSAQ2YD98 709 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 C9orf131Q5VYM1 1079 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 CCDC174Q6PII3 467 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 ACAD11Q709F0 780 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 APOBEC3FQ8IUX4 373 aaKnown RBP6.47□□□□□ -1.37
SF3B3-210ENST00000567654 KLHL23Q8NBE8 558 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 CNNM3Q8NE01 707 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 STK35Q8TDR2 534 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 CRYGNQ8WXF5 182 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 CUL5Q93034 780 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 WNK4Q96J92 1243 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 SDF4Q9BRK5 362 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 TRIM56Q9BRZ2 755 aaKnown RBP6.47□□□□□ -1.37
SF3B3-210ENST00000567654 RANBP17Q9H2T7 1088 aaKnown RBP6.47□□□□□ -1.37
SF3B3-210ENST00000567654 OSGEPQ9NPF4 335 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 FAM8A1Q9UBU6 413 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 VTI1BQ9UEU0 232 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 ZNF112Q9UJU3 913 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 MAN1B1Q9UKM7 699 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 SYNPO2Q9UMS6 1093 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 PCDHA5Q9Y5H7 936 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 PCDHA1Q9Y5I3 950 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 ZNF536O15090 1300 aa6.47□□□□□ -1.37
SF3B3-210ENST00000567654 NEMFO60524 1076 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 PAGE1O75459 146 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 ADCY5O95622 1261 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 CELA3AP09093 270 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 HOXA13P31271 388 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-210ENST00000567654 AFMP43652 599 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 IREB2P48200 963 aaKnown RBP6.46□□□□□ -1.38
SF3B3-210ENST00000567654 SARSP49591 514 aaKnown RBP6.46□□□□□ -1.38
SF3B3-210ENST00000567654 ZNF165P49910 485 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 PRKG1Q13976 671 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 MBTPS1Q14703 1052 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 NCAPHQ15003 741 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 POSTNQ15063 836 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 DUOXA2Q1HG44 320 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 ARL6IP4Q66PJ3 421 aaKnown RBP6.46□□□□□ -1.38
SF3B3-210ENST00000567654 IGF2-ASQ6U949 168 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 MAP4K3Q8IVH8 894 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 SCYL3Q8IZE3 742 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 AOPEPQ8N6M6 819 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 HAS1Q92839 578 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 PAGE5Q96GU1 130 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 MTMR9Q96QG7 549 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 MED15Q96RN5 788 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 WRNIP1Q96S55 665 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 PLIN2Q99541 437 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 MMTAG2Q9BU76 263 aaKnown RBP6.46□□□□□ -1.38
SF3B3-210ENST00000567654 AMNQ9BXJ7 453 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 ANO3Q9BYT9 981 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 HSD3B7Q9H2F3 369 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 PSTPIP2Q9H939 334 aa6.46□□□□□ -1.38
SF3B3-210ENST00000567654 LOC100289279A0A1B0GTE1 492 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 GIPC1O14908 333 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 SORBS3O60504 671 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 CTNND1O60716 968 aaKnown RBP6.45□□□□□ -1.38
SF3B3-210ENST00000567654 USP2O75604 605 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-210ENST00000567654 VCAM1P19320 739 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 MAOBP27338 520 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 NOS3P29474 1203 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 LONP1P36776 959 aaKnown RBP6.45□□□□□ -1.38
SF3B3-210ENST00000567654 PRPHP41219 470 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 TECP42680 631 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 TXKP42681 527 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 MRPL12P52815 198 aaKnown RBP6.45□□□□□ -1.38
SF3B3-210ENST00000567654 SPP2Q13103 211 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 CUL4BQ13620 913 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 MORC3Q14149 939 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 NT5DC1Q5TFE4 455 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 SLC30A10Q6XR72 485 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 MOB2Q70IA6 237 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 ELOA2Q8IYF1 753 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-210ENST00000567654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.45□□□□□ -1.385e-6■□□□□ 10.2
SF3B3-210ENST00000567654 SPATA20Q8TB22 786 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 LENG9Q96B70 501 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 LENG1Q96BZ8 264 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-210ENST00000567654 MBOAT7Q96N66 472 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 FEZ1Q99689 392 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 NRSN2Q9GZP1 204 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 KIAA1683Q9H0B3 1180 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 BLZF1Q9H2G9 400 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 SRA1Q9HD15 236 aaKnown RBP6.45□□□□□ -1.38
SF3B3-210ENST00000567654 ADARB2Q9NS39 739 aaKnown RBP6.45□□□□□ -1.38
SF3B3-210ENST00000567654 ANO10Q9NW15 660 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 COL20A1Q9P218 1284 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 SNCAIPQ9Y6H5 919 aa6.45□□□□□ -1.38
SF3B3-210ENST00000567654 DOCK3Q8IZD9 2030 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms