RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ADGRD2Q7Z7M1 963 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 TMEM87AQ8NBN3 555 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 ETNPPLQ8TBG4 499 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 CASD1Q96PB1 797 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 TRAIPQ9BWF2 469 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 CWH43Q9H720 699 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 M0R2N6 131 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 MAFO75444 373 aaPredicted RBP20.86■□□□□ 0.93
LINC01238-205ENST00000567549 HOXB8P17481 243 aaPredicted RBP20.86■□□□□ 0.93
LINC01238-205ENST00000567549 ATF7P17544 494 aaPredicted RBP20.86■□□□□ 0.93
LINC01238-205ENST00000567549 PPP2R5CQ13362 524 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 DUSP6Q16828 381 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 HERC4Q5GLZ8 1057 aaPredicted RBP20.86■□□□□ 0.93
LINC01238-205ENST00000567549 TWF2Q6IBS0 349 aaKnown RBP20.86■□□□□ 0.93
LINC01238-205ENST00000567549 TMC7Q7Z402 723 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 SLFN12Q8IYM2 578 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 MFSD14AQ96MC6 490 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 TCF25Q9BQ70 676 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 PHF20Q9BVI0 1012 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 C11orf16Q9NQ32 467 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 SUCLA2Q9P2R7 463 aaPredicted RBP20.86■□□□□ 0.93
LINC01238-205ENST00000567549 RAPGEFL1Q9UHV5 662 aa20.86■□□□□ 0.93
LINC01238-205ENST00000567549 IGKV6-21A0A0C4DH24 114 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 FSCN2O14926 492 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 P4HBP07237 508 aaKnown RBP20.85■□□□□ 0.93
LINC01238-205ENST00000567549 RFC5P40937 340 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 GIT2Q14161 759 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 SMC1AQ14683 1233 aaKnown RBP20.85■□□□□ 0.93
LINC01238-205ENST00000567549 B3GNT9Q6UX72 402 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 TCP11Q8WWU5 503 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 PGBD4Q96DM1 585 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 TMEM169Q96HH4 297 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 PHF7Q9BWX1 381 aaPredicted RBP20.85■□□□□ 0.93
LINC01238-205ENST00000567549 CLEC1BQ9P126 229 aa20.85■□□□□ 0.93
LINC01238-205ENST00000567549 CCNT1O60563 726 aaKnown RBP20.84■□□□□ 0.93
LINC01238-205ENST00000567549 POLGP54098 1239 aaPredicted RBP20.84■□□□□ 0.93
LINC01238-205ENST00000567549 TPRNQ4KMQ1 711 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 PLPP4Q5VZY2 271 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 GLB1LQ6UWU2 654 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 TMEM184AQ6ZMB5 413 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 CATSPER4Q7RTX7 472 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 RHPN2Q8IUC4 686 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 RNF135Q8IUD6 432 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 CASP10Q92851 521 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 CYP26B1Q9NR63 512 aa20.84■□□□□ 0.93
LINC01238-205ENST00000567549 BARX2Q9UMQ3 279 aaPredicted RBP20.84■□□□□ 0.93
LINC01238-205ENST00000567549 PIN4Q9Y237 131 aaKnown RBP20.84■□□□□ 0.93
LINC01238-205ENST00000567549 USP15Q9Y4E8 981 aaPredicted RBP20.84■□□□□ 0.93
LINC01238-205ENST00000567549 ASAP2O43150 1006 aa20.83■□□□□ 0.93
LINC01238-205ENST00000567549 PFKFB2O60825 505 aa20.83■□□□□ 0.93
LINC01238-205ENST00000567549 NCBP1Q09161 790 aaKnown RBP20.83■□□□□ 0.93
LINC01238-205ENST00000567549 SCRN1Q12765 414 aa20.83■□□□□ 0.93
LINC01238-205ENST00000567549 PCBP1Q15365 356 aaKnown RBP eCLIP20.83■□□□□ 0.93
LINC01238-205ENST00000567549 PSPC1Q8WXF1 523 aaKnown RBP20.83■□□□□ 0.93
LINC01238-205ENST00000567549 KCNMB3Q9NPA1 279 aa20.83■□□□□ 0.93
LINC01238-205ENST00000567549 A0A087WZ62 844 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 EDIL3O43854 480 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 PHKA2P46019 1235 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 ERVFC1P60507 584 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 RNASELQ05823 741 aaKnown RBP20.82■□□□□ 0.92
LINC01238-205ENST00000567549 TRIM29Q14134 588 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 CES5AQ6NT32 575 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 SRGAP1Q7Z6B7 1085 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 ZNF598Q86UK7 904 aaKnown RBP20.82■□□□□ 0.92
LINC01238-205ENST00000567549 C4orf19Q8IY42 314 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 URGCPQ8TCY9 931 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 HELQQ8TDG4 1101 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 ZNF668Q96K58 619 aaPredicted RBP20.82■□□□□ 0.92
LINC01238-205ENST00000567549 CEP170P1Q96L14 293 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 NLRP4Q96MN2 994 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 FDXACB1Q9BRP7 624 aaPredicted RBP20.82■□□□□ 0.92
LINC01238-205ENST00000567549 KCNJ14Q9UNX9 436 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 COL4A3BPQ9Y5P4 624 aa20.82■□□□□ 0.92
LINC01238-205ENST00000567549 PER2O15055 1255 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 GLP2RO95838 553 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 EPHA7Q15375 998 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 NPY5RQ15761 445 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 CLLU1OSQ5K130 101 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 PIK3AP1Q6ZUJ8 805 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 ANO5Q75V66 913 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 EDAQ92838 391 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 GJA10Q969M2 543 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 CCDC43Q96MW1 224 aaKnown RBP20.81■□□□□ 0.92
LINC01238-205ENST00000567549 NECTIN4Q96NY8 510 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 ZSWIM4Q9H7M6 989 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 KANSL3Q9P2N6 904 aa20.81■□□□□ 0.92
LINC01238-205ENST00000567549 ORC3Q9UBD5 711 aaPredicted RBP20.81■□□□□ 0.92
LINC01238-205ENST00000567549 CNTNAP2Q9UHC6 1331 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 LOC730098B7Z3J9 87 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 SLC37A4O43826 429 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 ZNF623O75123 536 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 CA8P35219 290 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 KRT2P35908 639 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 TECP42680 631 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 ITIH3Q06033 890 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 CBX2Q14781 532 aaPredicted RBP20.8■□□□□ 0.92
LINC01238-205ENST00000567549 ANKRD54Q6NXT1 300 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 LRRC55Q6ZSA7 311 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 SLC39A11Q8N1S5 342 aa20.8■□□□□ 0.92
LINC01238-205ENST00000567549 CNNM3Q8NE01 707 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms