RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 GPR32O75388 356 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 DGKIO75912 1065 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 FGFR1P11362 822 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 SARSP49591 514 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 GPC3P51654 580 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 PPP2R5CQ13362 524 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 LONRF3Q496Y0 759 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 TIGD5Q53EQ6 642 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 TPH2Q8IWU9 490 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 SLFN12Q8IYM2 578 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 SYMPKQ92797 1274 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 HAS1Q92839 578 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 TNFRSF25Q93038 417 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 ZSCAN31Q96LW9 406 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 SAMD11Q96NU1 681 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 NECAB3Q96P71 396 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 ASB2Q96Q27 587 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 C11orf84Q9BUA3 381 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 ALG13Q9NP73 1137 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 SUCLA2Q9P2R7 463 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 SQORQ9Y6N5 450 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 PRUNE2Q8WUY3 3088 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 A0A087WZ62 844 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 POTEMA6NI47 508 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 GRM6O15303 877 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 ST18O60284 1047 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 KCNA5P22460 613 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 RABEP1Q15276 862 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 ZNF174Q15697 407 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 AAK1Q2M2I8 961 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 FAM102BQ5T8I3 360 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 ANO5Q75V66 913 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 CMTR2Q8IYT2 770 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 ABI1Q8IZP0 508 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 ATXN2LQ8WWM7 1075 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 HLA-CQ95604 372 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 MRPL38Q96DV4 380 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 FDXACB1Q9BRP7 624 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 ADAMTS10Q9H324 1103 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 TTC12Q9H892 705 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 ATP6V0A4Q9HBG4 840 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 SH2B1Q9NRF2 756 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 C1orf112Q9NSG2 853 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 RWDD3Q9Y3V2 267 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 NCOR1O75376 2440 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 TTC28Q96AY4 2481 aa11.31□□□□□ -0.6
GTF3C1-206ENST00000566779 UNC80Q8N2C7 3258 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 A0A087WWV3 80 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 H3BNC9 293 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 ZBTB39O15060 712 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 TBX3O15119 743 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 P4HBP07237 508 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 DARSP14868 501 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 EIF4BP23588 611 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 YWHABP31946 246 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 CA8P35219 290 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 BMPR1AP36894 532 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 HMGN5P82970 282 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 EMC2Q15006 297 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 EPHA7Q15375 998 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 TARBP2Q15633 366 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 MCTP1Q6DN14 999 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 B3GNT9Q6UX72 402 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 SLC24A5Q71RS6 500 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 CATSPER4Q7RTX7 472 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 THNSL1Q8IYQ7 743 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 LINC01465Q8N7H1 131 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 PCMTD1Q96MG8 357 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 KIF2CQ99661 725 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 NIFKQ9BYG3 293 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 IGFLR1Q9H665 355 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 RC3H2Q9HBD1 1191 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 RGS18Q9NS28 235 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 PCDHA12Q9UN75 941 aa11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 PIN4Q9Y237 131 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-206ENST00000566779 C9IYK1 514 aa11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 H3BQ06 376 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 STBD1O95210 358 aa11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 POU3F3P20264 500 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 CLUL1Q15846 466 aa11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 TTC38Q5R3I4 469 aa11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 TWF2Q6IBS0 349 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 PADI6Q6TGC4 694 aa11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 MAEAQ7L5Y9 396 aa11.29□□□□□ -0.6
GTF3C1-206ENST00000566779 METTL3Q86U44 580 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms