RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 LAD1O00515 517 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 RB1P06400 928 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 CCT6AP40227 531 aaKnown RBP21.51■■□□□ 1.03
CCDC113-204ENST00000566498 FXR2P51116 673 aaKnown RBP eCLIP21.51■■□□□ 1.03
CCDC113-204ENST00000566498 CUL4AQ13619 759 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 PDIA5Q14554 519 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 MXD4Q14582 209 aaPredicted RBP21.51■■□□□ 1.03
CCDC113-204ENST00000566498 PTPROQ16827 1216 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 SPOUT1Q5T280 376 aaKnown RBP21.51■■□□□ 1.03
CCDC113-204ENST00000566498 DTHD1Q6ZMT9 781 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 MAEAQ7L5Y9 396 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 FERMT3Q86UX7 667 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 RNF149Q8NC42 400 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 ELAC1Q9H777 363 aaKnown RBP21.51■■□□□ 1.03
CCDC113-204ENST00000566498 IFT122Q9HBG6 1241 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 CHST12Q9NRB3 414 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 MRPL42Q9Y6G3 142 aaKnown RBP21.51■■□□□ 1.03
CCDC113-204ENST00000566498 PRRC2BQ5JSZ5 2229 aaKnown RBP21.5■■□□□ 1.03
CCDC113-204ENST00000566498 HAUS3Q68CZ6 603 aa21.5■■□□□ 1.03
CCDC113-204ENST00000566498 TWF2Q6IBS0 349 aaKnown RBP21.5■■□□□ 1.03
CCDC113-204ENST00000566498 POTEGQ6S5H5 508 aa21.5■■□□□ 1.03
CCDC113-204ENST00000566498 CLP1Q92989 425 aaKnown RBP21.5■■□□□ 1.03
CCDC113-204ENST00000566498 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.5■■□□□ 1.03
CCDC113-204ENST00000566498 PIN4Q9Y237 131 aaKnown RBP21.5■■□□□ 1.03
CCDC113-204ENST00000566498 FGFR1P11362 822 aa21.49■■□□□ 1.03
CCDC113-204ENST00000566498 TFDP1Q14186 410 aa21.49■■□□□ 1.03
CCDC113-204ENST00000566498 SRGAP1Q7Z6B7 1085 aa21.49■■□□□ 1.03
CCDC113-204ENST00000566498 ECHDC2Q86YB7 292 aa21.49■■□□□ 1.03
CCDC113-204ENST00000566498 ABI1Q8IZP0 508 aa21.49■■□□□ 1.03
CCDC113-204ENST00000566498 C11orf84Q9BUA3 381 aaPredicted RBP21.49■■□□□ 1.03
CCDC113-204ENST00000566498 XPNPEP1Q9NQW7 623 aa21.49■■□□□ 1.03
CCDC113-204ENST00000566498 DBR1Q9UK59 544 aaKnown RBP21.49■■□□□ 1.03
CCDC113-204ENST00000566498 STK24Q9Y6E0 443 aa21.49■■□□□ 1.03
CCDC113-204ENST00000566498 NLRC5Q86WI3 1866 aa21.49■■□□□ 1.03
CCDC113-204ENST00000566498 A0A0U1RQF3 1178 aa21.48■■□□□ 1.03
CCDC113-204ENST00000566498 VPS37CA5D8V6 355 aaPredicted RBP21.48■■□□□ 1.03
CCDC113-204ENST00000566498 USO1O60763 962 aaKnown RBP21.48■■□□□ 1.03
CCDC113-204ENST00000566498 PDCP20941 246 aa21.48■■□□□ 1.03
CCDC113-204ENST00000566498 PHKA2P46019 1235 aa21.48■■□□□ 1.03
CCDC113-204ENST00000566498 MRPL38Q96DV4 380 aaKnown RBP21.48■■□□□ 1.03
CCDC113-204ENST00000566498 PLVAPQ9BX97 442 aa21.48■■□□□ 1.03
CCDC113-204ENST00000566498 FOXD4L1Q9NU39 408 aa21.48■■□□□ 1.03
CCDC113-204ENST00000566498 ARID2Q68CP9 1835 aa21.48■■□□□ 1.03
CCDC113-204ENST00000566498 UNC80Q8N2C7 3258 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 ARHGEF35A5YM69 484 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 C5orf67F2Z3F1 127 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 HOXA2O43364 376 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 EOMESO95936 686 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 MUTP22033 750 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 ARL2P36404 184 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 PRPHP41219 470 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 NCBP1Q09161 790 aaKnown RBP21.47■■□□□ 1.03
CCDC113-204ENST00000566498 IL17AQ16552 155 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 KRT79Q5XKE5 535 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 IGSF22Q8N9C0 903 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 SNX29Q8TEQ0 813 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 MINDY3Q9H8M7 445 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 THEGQ9P2T0 379 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 KIAA1024Q9UPX6 916 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 COL4A4P53420 1690 aaPredicted RBP21.47■■□□□ 1.03
CCDC113-204ENST00000566498 COL4A6Q14031 1691 aa21.47■■□□□ 1.03
CCDC113-204ENST00000566498 A0A0C4DFX4 3053 aa21.46■■□□□ 1.03
CCDC113-204ENST00000566498 RALGAPA2Q2PPJ7 1873 aa21.46■■□□□ 1.03
CCDC113-204ENST00000566498 LINC00271P0C7V0 271 aa21.46■■□□□ 1.03
CCDC113-204ENST00000566498 SKIP12755 728 aa21.46■■□□□ 1.03
CCDC113-204ENST00000566498 PADI6Q6TGC4 694 aa21.46■■□□□ 1.03
CCDC113-204ENST00000566498 TMEM117Q9H0C3 514 aa21.46■■□□□ 1.03
CCDC113-204ENST00000566498 POLR3FQ9H1D9 316 aaPredicted RBP21.46■■□□□ 1.03
CCDC113-204ENST00000566498 ALG13Q9NP73 1137 aaKnown RBP21.46■■□□□ 1.03
CCDC113-204ENST00000566498 AAASQ9NRG9 546 aa21.46■■□□□ 1.03
CCDC113-204ENST00000566498 TYW1Q9NV66 732 aaKnown RBP21.46■■□□□ 1.03
CCDC113-204ENST00000566498 PCDHB12Q9Y5F1 795 aa21.46■■□□□ 1.03
CCDC113-204ENST00000566498 PP2D1A8MPX8 630 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 K7ELQ4 463 aaPredicted RBP21.45■■□□□ 1.02
CCDC113-204ENST00000566498 DLL1O00548 723 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 GRM6O15303 877 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 ERLIN2O94905 339 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 CDC25AP30304 524 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 PTENP60484 403 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 ZRSR1Q15695 479 aaKnown RBP21.45■■□□□ 1.02
CCDC113-204ENST00000566498 ECM1Q16610 540 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 LONRF3Q496Y0 759 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 MCPH1Q8NEM0 835 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 ASAP3Q8TDY4 903 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 ATXN2LQ8WWM7 1075 aaKnown RBP21.45■■□□□ 1.02
CCDC113-204ENST00000566498 CASD1Q96PB1 797 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 GPRC5CQ9NQ84 441 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 DDX19AQ9NUU7 478 aaKnown RBP21.45■■□□□ 1.02
CCDC113-204ENST00000566498 PLAGL2Q9UPG8 496 aa21.45■■□□□ 1.02
CCDC113-204ENST00000566498 FNDC1Q4ZHG4 1894 aaPredicted RBP21.44■■□□□ 1.02
CCDC113-204ENST00000566498 INO80B-WBP1J3KQ70 363 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 CSPG5O95196 566 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 GLRA2P23416 452 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 MRPS5P82675 430 aaKnown RBP21.44■■□□□ 1.02
CCDC113-204ENST00000566498 ATP2C1P98194 919 aaPredicted RBP21.44■■□□□ 1.02
CCDC113-204ENST00000566498 POU5F1BQ06416 359 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 NAALADL2Q58DX5 795 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 BRAPQ7Z569 592 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 KLHL23Q8NBE8 558 aa21.44■■□□□ 1.02
CCDC113-204ENST00000566498 P2RX5Q93086 422 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms