RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 EFCC1Q9HA90 598 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 NMRK2Q9NPI5 230 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 PLCB1Q9NQ66 1216 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 XPNPEP1Q9NQW7 623 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 AGPAT3Q9NRZ7 376 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 NRBP2Q9NSY0 501 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 ARMCX3Q9UH62 379 aaPredicted RBP9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 MYO6Q9UM54 1294 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 IVNS1ABPQ9Y6Y0 642 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 PHLPP2Q6ZVD8 1323 aa9.73□□□□□ -0.85
LSM3P5-201ENST00000566307 DOCK5Q9H7D0 1870 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 RASSF10A6NK89 507 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 SFI1A8K8P3 1242 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 K7ENM7 598 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 KIAA0391O15091 583 aaKnown RBP9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 NKRFO15226 690 aaKnown RBP eCLIP9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 P4HA2O15460 535 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 AKAP3O75969 853 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 GGPS1O95749 300 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 PGK2P07205 417 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 SLC10A3P09131 477 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 HOXC6P09630 235 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 HOXD8P13378 290 aaPredicted RBP9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 ATP4AP20648 1035 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 ADORA2AP29274 412 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 KRT9P35527 623 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 STAT5BP51692 787 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 NPEPPSP55786 919 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 HUNKP57058 714 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 DMP1Q13316 513 aaPredicted RBP9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 UTP14CQ5TAP6 766 aaKnown RBP9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 ZNF662Q6ZS27 426 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 GPR142Q7Z601 462 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 PLEKHH3Q7Z736 793 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 ANKRD13CQ8N6S4 541 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 TMEM161BQ8NDZ6 487 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 ZNF397Q8NF99 534 aaPredicted RBP9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 PRIMPOLQ96LW4 560 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 JPH2Q9BR39 696 aaPredicted RBP9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 KATNBL1Q9H079 304 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 R3HDMLQ9H3Y0 253 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 BCAS3Q9H6U6 928 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 SLC5A4Q9NY91 659 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 CEP72Q9P209 647 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 ARHGAP28Q9P2N2 729 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 PLAGL2Q9UPG8 496 aa9.72□□□□□ -0.85
LSM3P5-201ENST00000566307 SIP14410 1827 aa9.71□□□□□ -0.85
LSM3P5-201ENST00000566307 IGKV6-21A0A0C4DH24 114 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 MAFO75444 373 aaPredicted RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 ARIH2O95376 493 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 PIGRP01833 764 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 AFPP02771 609 aaKnown RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 XRCC5P13010 732 aaKnown RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 TRIM21P19474 475 aaKnown RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 ARL2P36404 184 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 NAMPTP43490 491 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 NPTX2P47972 431 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 KCNA1Q09470 495 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 KCNMA1Q12791 1236 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 KCNH2Q12809 1159 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 LAMC2Q13753 1193 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 EMC2Q15006 297 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 ZC2HC1CQ53FD0 456 aaPredicted RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 BRDTQ58F21 947 aaPredicted RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 PLA2G4FQ68DD2 849 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 RGMBQ6NW40 437 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 TAPT1Q6NXT6 567 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 SAPCD2Q86UD0 394 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 CREBRFQ8IUR6 639 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 REXO1L1PQ8IX06 675 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 CCDC170Q8IYT3 715 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 ZNF526Q8TF50 670 aaPredicted RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 CCDC102AQ96A19 550 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 SLC35C1Q96A29 364 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 IFT74Q96LB3 600 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 SMARCAD1Q9H4L7 1026 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 AZI2Q9H6S1 392 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 MLXIPQ9HAP2 919 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 USP20Q9Y2K6 914 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 FRMD4BQ9Y2L6 1034 aa9.71□□□□□ -0.86
LSM3P5-201ENST00000566307 MCM3APO60318 1980 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 RNF225M0QZC1 329 aaPredicted RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 PES1O00541 588 aaKnown RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 N4BP1O75113 896 aaKnown RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 GH1P01241 217 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 CCDC175P0C221 793 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 GARTP22102 1010 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 RFX1P22670 979 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 TCF7P36402 384 aaPredicted RBP9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 PEX3P56589 373 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 PTPN14Q15678 1187 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 PTPN21Q16825 1174 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 MORN1Q5T089 497 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 FAM102BQ5T8I3 360 aa9.7□□□□□ -0.86
LSM3P5-201ENST00000566307 DPY19L2P1Q6NXN4 242 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms