RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	SEPT4	O43236	478 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	ATP9A	O75110	1047 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	EIF3J	O75822	258 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	URI1	O94763	535 aa	Predicted RBP	11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	GCNT3	O95395	438 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	ABL1	P00519	1130 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	AKR1A1	P14550	325 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	HNRNPH3	P31942	346 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	CDK17	Q00537	523 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	KCNMA1	Q12791	1236 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	LHX8	Q68G74	356 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	MYCT1	Q8N699	235 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	FIZ1	Q96SL8	496 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	MPHOSPH6	Q99547	160 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	MMRN2	Q9H8L6	949 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	PARVG	Q9HBI0	331 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	VTA1	Q9NP79	307 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	TYW1	Q9NV66	732 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	DDX20	Q9UHI6	824 aa	Known RBP	11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	ZMYM2	Q9UBW7	1377 aa		11.13	□□□□□ -0.63
TCF4-231	ENST00000566279	ARHGEF35	A5YM69	484 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	EIF3D	O15371	548 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	CALU	O43852	315 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	KIF5C	O60282	957 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	P4HB	P07237	508 aa	Known RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	TXN	P10599	105 aa	Known RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	KCNA4	P22459	653 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	GUCY2C	P25092	1073 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	NMT1	P30419	496 aa	Known RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	TNFAIP2	Q03169	654 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	KCNA1	Q09470	495 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	ARHGAP29	Q52LW3	1261 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	ZNF397	Q8NF99	534 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	BAP1	Q92560	729 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	INPP4A	Q96PE3	977 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	MAF1	Q9H063	256 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	TBC1D22B	Q9NU19	505 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	ODF2L	Q9ULJ1	636 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	NR3C1	P04150	777 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	EN2	P19622	333 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	UBA1	P22314	1058 aa	Known RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	BEX3	Q00994	111 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	SP4	Q02446	784 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	MAPK7	Q13164	816 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	FRMD5	Q7Z6J6	570 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	CCDC170	Q8IYT3	715 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	U2AF1L4	Q8WU68	220 aa	Known RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	PPP1R13L	Q8WUF5	828 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	EDEM3	Q9BZQ6	932 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	ZSWIM4	Q9H7M6	989 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	SEL1L	Q9UBV2	794 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	FAM184B	Q9ULE4	1060 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	PLAGL2	Q9UPG8	496 aa		11.12	□□□□□ -0.63
TCF4-231	ENST00000566279		V9GYY5	206 aa	Predicted RBP	11.12	□□□□□ -0.63
TCF4-231	ENST00000566279	UBE4B	O95155	1302 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	DYNC1LI2	O43237	492 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	TGFB1I1	O43294	461 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	NOL4	O94818	638 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	LYPLA2	O95372	231 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	XRRA1	Q6P2D8	792 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	CCDC62	Q6P9F0	684 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	PADI6	Q6TGC4	694 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	TLK2	Q86UE8	772 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	DAW1	Q8N136	415 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	NEK11	Q8NG66	645 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	SCFD2	Q8WU76	684 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	XPNPEP3	Q9NQH7	507 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	DDX41	Q9UJV9	622 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	DBR1	Q9UK59	544 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	GNE	Q9Y223	722 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	MRFAP1	Q9Y605	127 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	LRRC53	A6NM62	1247 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	EIF3CL	B5ME19	914 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	SLC16A3	O15427	465 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	HIP1R	O75146	1068 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	CAPN15	O75808	1086 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	AKAP3	O75969	853 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	CCNE2	O96020	404 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	PLEK	P08567	350 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	C6orf222	P0C671	652 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	RARB	P10826	455 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	CYLC1	P35663	651 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	QARS	P47897	775 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	UGCG	Q16739	394 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	ZNF569	Q5MCW4	686 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	PDXDC1	Q6P996	788 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	RRAGA	Q7L523	313 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	ZNF720	Q7Z2F6	126 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	DIS3L	Q8TF46	1054 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	EIF3C	Q99613	913 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	LSM14B	Q9BX40	385 aa	Known RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	IKZF4	Q9H2S9	585 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	TRIM10	Q9UDY6	481 aa		11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.11	□□□□□ -0.63
TCF4-231	ENST00000566279	SAMM50	Q9Y512	469 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms