RNA–Protein interactions for RNA: ENST00000566225.1

LINC01254-201, Transcript of long intergenic non-protein coding RNA 1254, humanhuman

BASIC

Gene LINC01254, Length 2,908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01254-201ENST00000566225 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
LINC01254-201ENST00000566225 CCHCR1Q8TD31 782 aa12.97□□□□□ -0.33
LINC01254-201ENST00000566225 NAP1L3Q99457 506 aaPredicted RBP12.97□□□□□ -0.33
LINC01254-201ENST00000566225 REEP2Q9BRK0 252 aa12.97□□□□□ -0.33
LINC01254-201ENST00000566225 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
LINC01254-201ENST00000566225 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.97□□□□□ -0.33
LINC01254-201ENST00000566225 CARD9Q9H257 536 aa12.97□□□□□ -0.33
LINC01254-201ENST00000566225 DNAJC17Q9NVM6 304 aaKnown RBP12.97□□□□□ -0.33
LINC01254-201ENST00000566225 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
LINC01254-201ENST00000566225 MYH7BA7E2Y1 1941 aa12.97□□□□□ -0.33
LINC01254-201ENST00000566225 FAM187AA6NFU0 413 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 ANKRD63C9JTQ0 380 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 PPP1R11O60927 126 aaPredicted RBP12.96□□□□□ -0.33
LINC01254-201ENST00000566225 LRRN2O75325 713 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 TTC27Q6P3X3 843 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 EXOC3L1Q86VI1 746 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 KCNMB3Q9NPA1 279 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 TTC7AQ9ULT0 858 aaPredicted RBP12.96□□□□□ -0.33
LINC01254-201ENST00000566225 COG5Q9UP83 839 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 RIPK2O43353 540 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 CALUO43852 315 aaPredicted RBP12.96□□□□□ -0.33
LINC01254-201ENST00000566225 SUN1O94901 812 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.33
LINC01254-201ENST00000566225 NPEPPSP55786 919 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 COPS2P61201 443 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 CYP4A11Q02928 519 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 CAPRIN2Q6IMN6 1127 aaKnown RBP12.96□□□□□ -0.33
LINC01254-201ENST00000566225 C16orf86Q6ZW13 317 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 ZC3H3Q8IXZ2 948 aaKnown RBP12.96□□□□□ -0.33
LINC01254-201ENST00000566225 PRELID2Q8N945 189 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
LINC01254-201ENST00000566225 DNAJC12Q9UKB3 198 aa12.96□□□□□ -0.33
LINC01254-201ENST00000566225 TMEM120BA0PK00 339 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 EME2A4GXA9 379 aaPredicted RBP12.95□□□□□ -0.34
LINC01254-201ENST00000566225 TMEM253P0C7T8 217 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 TNFAIP3P21580 790 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 SOX5P35711 763 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 SLC12A3P55017 1021 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 PPATQ06203 517 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 DHX34Q14147 1143 aaKnown RBP12.95□□□□□ -0.34
LINC01254-201ENST00000566225 GIT2Q14161 759 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 SPDYCQ5MJ68 293 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 TAOK1Q7L7X3 1001 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 CCDC105Q8IYK2 499 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 ARHGEF2Q92974 986 aaKnown RBP12.95□□□□□ -0.34
LINC01254-201ENST00000566225 ANKRD2Q9GZV1 360 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 PSTPIP2Q9H939 334 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 JMJD4Q9H9V9 463 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 ARHGEF10LQ9HCE6 1279 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 BATF3Q9NR55 127 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 INTUQ9ULD6 942 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 TRAF3IP3Q9Y228 551 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 ALG6Q9Y672 507 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 ROBO3Q96MS0 1386 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 TCRBV7S2A1N4TA0A589 114 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 LMNB1P20700 586 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 PTGIRP43119 386 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 TRIM68Q6AZZ1 485 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 CCDC137Q6PK04 289 aaKnown RBP12.95□□□□□ -0.34
LINC01254-201ENST00000566225 ADGRF4Q8IZF3 695 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 ZDHHC14Q8IZN3 488 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 ARMC2Q8NEN0 867 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 HOMER3Q9NSC5 361 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 CTTNBP2NLQ9P2B4 639 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 CTNNAL1Q9UBT7 734 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 RREB1Q92766 1687 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 SNED1Q8TER0 1413 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 PHF2O75151 1096 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 GH1P01241 217 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 VCAM1P19320 739 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 CCND1P24385 295 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 MSH2P43246 934 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 CATSPER3Q86XQ3 398 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 KSR1Q8IVT5 923 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 FITM2Q8N6M3 262 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 SLC30A5Q8TAD4 765 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 POP1Q99575 1024 aaKnown RBP12.95□□□□□ -0.34
LINC01254-201ENST00000566225 YIPF3Q9GZM5 350 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
LINC01254-201ENST00000566225 DCCP43146 1447 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 TAF1P21675 1872 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 GSTO1P78417 241 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 PPP2R5EQ16537 467 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 SEPT14Q6ZU15 432 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 KCTD1Q719H9 257 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 SLC17A8Q8NDX2 589 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 STMN4Q9H169 189 aaPredicted RBP12.94□□□□□ -0.34
LINC01254-201ENST00000566225 SLC5A4Q9NY91 659 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 USP17L10C9JJH3 530 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 TRIM49P0CI25 452 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 TRIM49CP0CI26 452 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 RPL13P26373 211 aaKnown RBP12.94□□□□□ -0.34
LINC01254-201ENST00000566225 IRX1P78414 480 aaPredicted RBP12.94□□□□□ -0.34
LINC01254-201ENST00000566225 LACTBP83111 547 aaPredicted RBP12.94□□□□□ -0.34
LINC01254-201ENST00000566225 BNIP1Q12981 228 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 PICALMQ13492 652 aa12.94□□□□□ -0.34
LINC01254-201ENST00000566225 MESDQ14696 234 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms