RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 NETO1Q8TDF5 533 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 SHDQ96IW2 340 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 CDHR1Q96JP9 859 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 BCO2Q9BYV7 579 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 AZI2Q9H6S1 392 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 SALL3Q9BXA9 1300 aa12.76□□□□□ -0.37
CAPN3-215ENST00000565559 SLC30A4O14863 429 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 PPP1R11O60927 126 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-215ENST00000565559 MX1P20591 662 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 ALDH7A1P49419 539 aaKnown RBP12.75□□□□□ -0.37
CAPN3-215ENST00000565559 FRMPD4Q14CM0 1322 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 C15orf39Q6ZRI6 1047 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 VPS52Q8N1B4 723 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 SLC44A3Q8N4M1 653 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 GPR152Q8TDT2 470 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 RSAD2Q8WXG1 361 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 CASD1Q96PB1 797 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 EPC1Q9H2F5 836 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 NOC2LQ9Y3T9 749 aaKnown RBP12.75□□□□□ -0.37
CAPN3-215ENST00000565559 ADGRG1Q9Y653 693 aa12.75□□□□□ -0.37
CAPN3-215ENST00000565559 FNDC1Q4ZHG4 1894 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-215ENST00000565559 ZMYM6O95789 1325 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 GSTTP1A0A1W2PQM5 241 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 CARNS1A5YM72 827 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 TBC1D4O60343 1298 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 FAM189BP81408 668 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 CSTF1Q05048 431 aaKnown RBP12.74□□□□□ -0.37
CAPN3-215ENST00000565559 PTPN14Q15678 1187 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 PCNX4Q63HM2 1172 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 HOMER1Q86YM7 354 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 MAML2Q8IZL2 1156 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-215ENST00000565559 OTUD7AQ8TE49 926 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-215ENST00000565559 SLC22A17Q8WUG5 538 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 DDX1Q92499 740 aaKnown RBP12.74□□□□□ -0.37
CAPN3-215ENST00000565559 MRPL9Q9BYD2 267 aaKnown RBP12.74□□□□□ -0.37
CAPN3-215ENST00000565559 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 ZSCAN32Q9NX65 697 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 IRAK3Q9Y616 596 aa12.74□□□□□ -0.37
CAPN3-215ENST00000565559 FANCMQ8IYD8 2048 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 KLRF2D3W0D1 207 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 METAP2P50579 478 aaKnown RBP eCLIP12.73□□□□□ -0.37
CAPN3-215ENST00000565559 POLGP54098 1239 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-215ENST00000565559 PDE1AP54750 535 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 PLCB4Q15147 1175 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 ELMSAN1Q6PJG2 1045 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 GPRASP2Q96D09 838 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-215ENST00000565559 EMILIN2Q9BXX0 1053 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 FOXQ1Q9C009 403 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 ZBP1Q9H171 429 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 RAB23Q9ULC3 237 aa12.73□□□□□ -0.37
CAPN3-215ENST00000565559 NEDD4P46934 1319 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 CTSAP10619 480 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 GLULP15104 373 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 KCNA2P16389 499 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 ZSCAN20P17040 1043 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-215ENST00000565559 MTHFD1LQ6UB35 978 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 TBC1D10CQ8IV04 446 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 RNF169Q8NCN4 708 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 ZBTB44Q8NCP5 570 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 TRAPPC12Q8WVT3 735 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 AUTS2Q8WXX7 1259 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 CUL5Q93034 780 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 OSBPL3Q9H4L5 887 aa12.72□□□□□ -0.37
CAPN3-215ENST00000565559 CEP295Q9C0D2 2601 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 MYH6P13533 1939 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-215ENST00000565559 ATP9AO75110 1047 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 TGM1P22735 817 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 KLRC2P26717 231 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 MAGEA9P43362 315 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 BCAR1P56945 870 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 STARD6P59095 220 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 DDX53Q86TM3 631 aaKnown RBP12.71□□□□□ -0.37
CAPN3-215ENST00000565559 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 STAG2Q8N3U4 1231 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 ENAHQ8N8S7 591 aaPredicted RBP12.71□□□□□ -0.37
CAPN3-215ENST00000565559 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 PARD6AQ9NPB6 346 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 SLC2A4RGQ9NR83 387 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 DPP7Q9UHL4 492 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 DENND4AQ7Z401 1863 aa12.71□□□□□ -0.37
CAPN3-215ENST00000565559 CLUHO75153 1309 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 KANSL1LA0AUZ9 987 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 NT5C1B-RDH14C9J2C7 533 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 LILRB5O75023 590 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 N4BP1O75113 896 aaKnown RBP12.7□□□□□ -0.38
CAPN3-215ENST00000565559 LRRN2O75325 713 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms