RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 BMP2KQ9NSY1 1161 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-212ENST00000565517 DACT1Q9NYF0 836 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 LRFN2Q9ULH4 789 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 KIAA1024Q9UPX6 916 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 PCDHB7Q9Y5E2 793 aa17.16■□□□□ 0.34
COMMD4-212ENST00000565517 ARHGEF35A5YM69 484 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 SLC26A4O43511 780 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 CSDE1O75534 798 aaKnown RBP17.15■□□□□ 0.34
COMMD4-212ENST00000565517 SRGAP2CP0DJJ0 459 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 TFDP1Q14186 410 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
COMMD4-212ENST00000565517 HYIQ5T013 277 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 IFNLR1Q8IU57 520 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-212ENST00000565517 FIBCD1Q8N539 461 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 RNF149Q8NC42 400 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 AK8Q96MA6 479 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 MMTAG2Q9BU76 263 aaKnown RBP17.15■□□□□ 0.34
COMMD4-212ENST00000565517 TRAIPQ9BWF2 469 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 NFKBIZQ9BYH8 718 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 CERS4Q9HA82 394 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 DDX19AQ9NUU7 478 aaKnown RBP17.15■□□□□ 0.34
COMMD4-212ENST00000565517 TMEM161AQ9NX61 479 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 TRANK1O15050 2925 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 MYH15Q9Y2K3 1946 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 ADGRA3Q8IWK6 1321 aa17.15■□□□□ 0.34
COMMD4-212ENST00000565517 VWA3AA6NCI4 1184 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 PP2D1A8MPX8 630 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 USO1O60763 962 aaKnown RBP17.14■□□□□ 0.33
COMMD4-212ENST00000565517 HSP90AA1P07900 732 aaKnown RBP17.14■□□□□ 0.33
COMMD4-212ENST00000565517 CYP11B2P19099 503 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 FGFR4P22455 802 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 PHKA2P46019 1235 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 PTENP60484 403 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 ADGRE1Q14246 886 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 PADI6Q6TGC4 694 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 CATSPER4Q7RTX7 472 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 SPRED2Q7Z698 418 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 CMTR2Q8IYT2 770 aaKnown RBP17.14■□□□□ 0.33
COMMD4-212ENST00000565517 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
COMMD4-212ENST00000565517 DNM3Q9UQ16 869 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 RWDD3Q9Y3V2 267 aa17.14■□□□□ 0.33
COMMD4-212ENST00000565517 A0A0U1RQF3 1178 aa17.13■□□□□ 0.33
COMMD4-212ENST00000565517 EPOPA6NHQ4 379 aa17.13■□□□□ 0.33
COMMD4-212ENST00000565517 EYA4O95677 639 aa17.13■□□□□ 0.33
COMMD4-212ENST00000565517 EOMESO95936 686 aa17.13■□□□□ 0.33
COMMD4-212ENST00000565517 CDC25AP30304 524 aa17.13■□□□□ 0.33
COMMD4-212ENST00000565517 BTG3Q14201 252 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-212ENST00000565517 MAFAQ8NHW3 353 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-212ENST00000565517 NT5C3AQ9H0P0 336 aa17.13■□□□□ 0.33
COMMD4-212ENST00000565517 POLR3FQ9H1D9 316 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-212ENST00000565517 BHMT2Q9H2M3 363 aa17.13■□□□□ 0.33
COMMD4-212ENST00000565517 LMCD1Q9NZU5 365 aa17.13■□□□□ 0.33
COMMD4-212ENST00000565517 COL4A4P53420 1690 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-212ENST00000565517 KIAA1671Q9BY89 1806 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 RFXAPO00287 272 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 HOXA2O43364 376 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 RB1P06400 928 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 LINC00271P0C7V0 271 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 SKIP12755 728 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 IGFBP4P22692 258 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 GLRA2P23416 452 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
COMMD4-212ENST00000565517 CAPSQ13938 189 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 PTPAQ15257 358 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 TMEM192Q8IY95 271 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 C17orf80Q9BSJ5 609 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 AGPAT5Q9NUQ2 364 aa17.12■□□□□ 0.33
COMMD4-212ENST00000565517 MORC2Q9Y6X9 1032 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-212ENST00000565517 C5orf67F2Z3F1 127 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 GTPBP6O43824 516 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-212ENST00000565517 LPXNO60711 386 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 ZNF623O75123 536 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 AXLP30530 894 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 GRB10Q13322 594 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 MAEAQ7L5Y9 396 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 ZNF598Q86UK7 904 aaKnown RBP17.11■□□□□ 0.33
COMMD4-212ENST00000565517 FBXO22Q8NEZ5 403 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 GPRC5CQ9NQ84 441 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
COMMD4-212ENST00000565517 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 MTCH2Q9Y6C9 303 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 MYH11P35749 1972 aa17.11■□□□□ 0.33
COMMD4-212ENST00000565517 E9PMD0 336 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 H3BNC9 293 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 HOXA11P31270 313 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-212ENST00000565517 BMPR1AP36894 532 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 UBA7P41226 1012 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 RAB27AP51159 221 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 NCBP1Q09161 790 aaKnown RBP17.1■□□□□ 0.33
COMMD4-212ENST00000565517 FAM102BQ5T8I3 360 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 TWF2Q6IBS0 349 aaKnown RBP17.1■□□□□ 0.33
COMMD4-212ENST00000565517 FAM173BQ6P4H8 233 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 CABP7Q86V35 215 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 RSPH1Q8WYR4 309 aa17.1■□□□□ 0.33
COMMD4-212ENST00000565517 KIFAP3Q92845 792 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms