RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 HAS1Q92839 578 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 TMEM143Q96AN5 459 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 DYDC2Q96IM9 177 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 TCF25Q9BQ70 676 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 CWH43Q9H720 699 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 KCNMB3Q9NPA1 279 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 ENTPD7Q9NQZ7 604 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 BMP2KQ9NSY1 1161 aaPredicted RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 HCSTQ9UBK5 93 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 PRKAG3Q9UGI9 489 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 PIN4Q9Y237 131 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 MYH6P13533 1939 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 STK36Q9NRP7 1315 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 LAMA3Q16787 3333 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 TANC1Q9C0D5 1861 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 A0A087WWV3 80 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 IGKV6-21A0A0C4DH24 114 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 ZBTB39O15060 712 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 ASAP2O43150 1006 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 SLITRK3O94933 977 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 SEC24BO95487 1268 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 ALDH2P05091 517 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 PBX3P40426 434 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 RFC5P40937 340 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 BCAR1P56945 870 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 PLCB3Q01970 1234 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 CYP4A11Q02928 519 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 SMAD4Q13485 552 aaKnown RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 COL19A1Q14993 1142 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 SAFBQ15424 915 aaKnown RBP eCLIP7.17□□□□□ -1.26
TCF4-228ENST00000565393 SMAD2Q15796 467 aaKnown RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 CALCRLQ16602 461 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 EARS2Q5JPH6 523 aaKnown RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 GLB1LQ6UWU2 654 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 POTEDQ86YR6 584 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 C4orf19Q8IY42 314 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 LRRC43Q8N309 656 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 TCP11Q8WWU5 503 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 PSPC1Q8WXF1 523 aaKnown RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 LPPQ93052 612 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 PGBD4Q96DM1 585 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 FAM122AQ96E09 287 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 RPGRIP1Q96KN7 1286 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 CEP89Q96ST8 783 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 POP1Q99575 1024 aaKnown RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 CDCA3Q99618 268 aaPredicted RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 EIF2AK1Q9BQI3 630 aaKnown RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 APOL5Q9BWW9 433 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 ZSWIM4Q9H7M6 989 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 TTC12Q9H892 705 aaPredicted RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 NGRNQ9NPE2 291 aaKnown RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 CLEC1BQ9P126 229 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 VAV3Q9UKW4 847 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 BARX2Q9UMQ3 279 aaPredicted RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 LZTS1Q9Y250 596 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 INPP5FQ9Y2H2 1132 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 COL4A3BPQ9Y5P4 624 aa7.17□□□□□ -1.26
TCF4-228ENST00000565393 TRIP12Q14669 1992 aaPredicted RBP7.17□□□□□ -1.26
TCF4-228ENST00000565393 FAM205CA6NFA0 338 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 C19orf67A6NJJ6 358 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 DCXO43602 365 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 JAK2O60674 1132 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 TBX10O75333 385 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 OFD1O75665 1012 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 LARGE1O95461 756 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 CENPBP07199 599 aaPredicted RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 SRGAP2BP0DMP2 458 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 MCM7P33993 719 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 PPM1AP35813 382 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 TECP42680 631 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 PHKA2P46019 1235 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 RBM10P98175 930 aaKnown RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 GUCY1B3Q02153 619 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 ZP2Q05996 745 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 LAMTOR4Q0VGL1 99 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 COASYQ13057 564 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 GNL2Q13823 731 aaKnown RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 NOMO2Q5JPE7 1267 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 CLLU1OSQ5K130 101 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 MAEAQ7L5Y9 396 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 SRGAP1Q7Z6B7 1085 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 DIS3L2Q8IYB7 885 aaKnown RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 MRPL43Q8N983 215 aaKnown RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 RNF149Q8NC42 400 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 GTF3C6Q969F1 213 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 TMEM169Q96HH4 297 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 MSLNLQ96KJ4 702 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 CCDC43Q96MW1 224 aaKnown RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 FAM193BQ96PV7 902 aaPredicted RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 MTRQ99707 1265 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 LXNQ9BS40 222 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 MRPL9Q9BYD2 267 aaKnown RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 GBP3Q9H0R5 595 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 IFT122Q9HBG6 1241 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 FAM105AQ9NUU6 356 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 RNF19AQ9NV58 838 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 WRAP73Q9P2S5 460 aaPredicted RBP7.16□□□□□ -1.26
TCF4-228ENST00000565393 LIMCH1Q9UPQ0 1083 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 HCN4Q9Y3Q4 1203 aa7.16□□□□□ -1.26
TCF4-228ENST00000565393 PCDHB2Q9Y5E7 798 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms