RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 FAM186BQ8IYM0 893 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 SMC1BQ8NDV3 1235 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 BSNDQ8WZ55 320 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 COPS5Q92905 334 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 BORCS6Q96GS4 357 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 DNAJC7Q99615 494 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 TINF2Q9BSI4 451 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 SMARCAD1Q9H4L7 1026 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 ZNF236Q9UL36 1845 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 FAM155AB1AL88 458 aaPredicted RBP21.43■■□□□ 1.02
CLN6-205ENST00000564846 AFPP02771 609 aaKnown RBP21.43■■□□□ 1.02
CLN6-205ENST00000564846 ZBED6P86452 979 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 ARHGAP1Q07960 439 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 C17orf99Q6UX52 265 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 MAP4K3Q8IVH8 894 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 EXOC8Q8IYI6 725 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 ATP8B4Q8TF62 1192 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 EMID1Q96A84 441 aaPredicted RBP21.43■■□□□ 1.02
CLN6-205ENST00000564846 MMRN2Q9H8L6 949 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 MCM3APO60318 1980 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 DENND3A2RUS2 1198 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 PPP2R5AQ15172 486 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 DNTTIP2Q5QJE6 756 aaKnown RBP21.43■■□□□ 1.02
CLN6-205ENST00000564846 MORN1Q5T089 497 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 CYP26C1Q6V0L0 522 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 KCNN1Q92952 543 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 HHIPL1Q96JK4 782 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 EDEM3Q9BZQ6 932 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 ABHD16BQ9H3Z7 469 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 ZFYVE28Q9HCC9 887 aa21.43■■□□□ 1.02
CLN6-205ENST00000564846 ABT1Q9ULW3 272 aaKnown RBP21.43■■□□□ 1.02
CLN6-205ENST00000564846 USP27XA6NNY8 438 aa21.42■■□□□ 1.02
CLN6-205ENST00000564846 EXOC3O60645 756 aa21.42■■□□□ 1.02
CLN6-205ENST00000564846 ARL2P36404 184 aa21.42■■□□□ 1.02
CLN6-205ENST00000564846 CYP2J2P51589 502 aa21.42■■□□□ 1.02
CLN6-205ENST00000564846 MAP2K5Q13163 448 aa21.42■■□□□ 1.02
CLN6-205ENST00000564846 TMEM63BQ5T3F8 832 aa21.42■■□□□ 1.02
CLN6-205ENST00000564846 NEK11Q8NG66 645 aa21.42■■□□□ 1.02
CLN6-205ENST00000564846 KIFC3Q9BVG8 833 aa21.42■■□□□ 1.02
CLN6-205ENST00000564846 FAM207AQ9NSI2 230 aaPredicted RBP21.42■■□□□ 1.02
CLN6-205ENST00000564846 TRMT1Q9NXH9 659 aaKnown RBP21.42■■□□□ 1.02
CLN6-205ENST00000564846 ZSCAN12O43309 604 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 MAFO75444 373 aaPredicted RBP21.41■■□□□ 1.02
CLN6-205ENST00000564846 NAMPTP43490 491 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 KCNMA1Q12791 1236 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 IRF5Q13568 498 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 DCAF17Q5H9S7 520 aaPredicted RBP21.41■■□□□ 1.02
CLN6-205ENST00000564846 PPTC7Q8NI37 304 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 NPLOC4Q8TAT6 608 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 SLC35C1Q96A29 364 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 AGPAT5Q9NUQ2 364 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 ARHGAP28Q9P2N2 729 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 KIF3CO14782 793 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 GAS2O43903 313 aaKnown RBP21.41■■□□□ 1.02
CLN6-205ENST00000564846 MARK3P27448 753 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 ADCYAP1R1P41586 468 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 ACVR2BQ13705 512 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 TRIM50Q86XT4 487 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 CCDC155Q8N6L0 562 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 TMEM143Q96AN5 459 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 PPP1R13BQ96KQ4 1090 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 ZNHIT6Q9NWK9 470 aaKnown RBP21.41■■□□□ 1.02
CLN6-205ENST00000564846 ERAP1Q9NZ08 941 aa21.41■■□□□ 1.02
CLN6-205ENST00000564846 SOWAHDA6NJG2 315 aa21.4■■□□□ 1.02
CLN6-205ENST00000564846 TMEM88BA6NKF7 163 aa21.4■■□□□ 1.02
CLN6-205ENST00000564846 HOXC6P09630 235 aa21.4■■□□□ 1.02
CLN6-205ENST00000564846 PLCB4Q15147 1175 aa21.4■■□□□ 1.02
CLN6-205ENST00000564846 TCERG1LQ5VWI1 586 aa21.4■■□□□ 1.02
CLN6-205ENST00000564846 XXYLT1Q8NBI6 393 aa21.4■■□□□ 1.02
CLN6-205ENST00000564846 ADGRA3Q8IWK6 1321 aa21.39■■□□□ 1.02
CLN6-205ENST00000564846 MAPK13O15264 365 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 HBP1O60381 514 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 GLRA2P23416 452 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 TM4SF4P48230 202 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 MEA1Q16626 185 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 DUSP28Q4G0W2 176 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 IQSEC1Q6DN90 963 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 C16orf45Q96MC5 204 aaPredicted RBP21.39■■□□□ 1.01
CLN6-205ENST00000564846 JPH2Q9BR39 696 aaPredicted RBP21.39■■□□□ 1.01
CLN6-205ENST00000564846 CBWD1Q9BRT8 395 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 HSPBP1Q9NZL4 362 aa21.39■■□□□ 1.01
CLN6-205ENST00000564846 GTPBP10A4D1E9 387 aaKnown RBP21.38■■□□□ 1.01
CLN6-205ENST00000564846 CNGA1P29973 690 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 PTPN14Q15678 1187 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 BRDTQ58F21 947 aaPredicted RBP21.38■■□□□ 1.01
CLN6-205ENST00000564846 RAD9BQ6WBX8 426 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 TOGARAM2Q6ZUX3 1019 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 NYAP1Q6ZVC0 841 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 INTS8Q75QN2 995 aaKnown RBP21.38■■□□□ 1.01
CLN6-205ENST00000564846 DEPTORQ8TB45 409 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 ASAP3Q8TDY4 903 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 TCP11Q8WWU5 503 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 ZHX1Q9UKY1 873 aaPredicted RBP21.38■■□□□ 1.01
CLN6-205ENST00000564846 PPP2R2CQ9Y2T4 447 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 GOLGA6L9A6NEM1 432 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 EPHB6O15197 1021 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 GJC2Q5T442 439 aaPredicted RBP21.38■■□□□ 1.01
CLN6-205ENST00000564846 IER5Q5VY09 327 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 CACNA2D4Q7Z3S7 1137 aa21.38■■□□□ 1.01
CLN6-205ENST00000564846 LSM14BQ9BX40 385 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms