RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.6■□□□□ 0.41
LINC00554-201ENST00000564841 COA7Q96BR5 231 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 NUDT12Q9BQG2 462 aa17.6■□□□□ 0.41
LINC00554-201ENST00000564841 GPR75-ASB3A0A0A6YYF3 556 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 RTN3O95197 1032 aaPredicted RBP17.59■□□□□ 0.41
LINC00554-201ENST00000564841 RAD23BP54727 409 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 RHBDL3P58872 404 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 MGAT5Q09328 741 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 TRAF1Q13077 416 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 ZC3H12AQ5D1E8 599 aaKnown RBP17.59■□□□□ 0.41
LINC00554-201ENST00000564841 POTEAQ6S8J7 498 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 SEPT14Q6ZU15 432 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 ETNK1Q9HBU6 452 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 DDX4Q9NQI0 724 aaKnown RBP17.59■□□□□ 0.41
LINC00554-201ENST00000564841 DUOX1Q9NRD9 1551 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 H0YIN7 160 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 RFC5P40937 340 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 ATP11AP98196 1134 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 ADAM9Q13443 819 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 ASIC2Q16515 512 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 HOOK3Q86VS8 718 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 TPCN2Q8NHX9 752 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 OSGEPQ9NPF4 335 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 MYH4Q9Y623 1939 aa17.59■□□□□ 0.41
LINC00554-201ENST00000564841 SMCO2A6NFE2 343 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 FGRP09769 529 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 POLE2P56282 527 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 NFIAQ12857 509 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 LLGL1Q15334 1064 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 KCNK18Q7Z418 384 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 NEK9Q8TD19 979 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 CEP95Q96GE4 821 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 MASTLQ96GX5 879 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 PIGSQ96S52 555 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 EPAS1Q99814 870 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 RAB17Q9H0T7 212 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 BLOC1S4Q9NUP1 217 aa17.58■□□□□ 0.41
LINC00554-201ENST00000564841 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 POTEMA6NI47 508 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 SLC9A1P19634 815 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 LACTBP83111 547 aaPredicted RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 POU5F1Q01860 360 aaKnown RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 TNIP1Q15025 636 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 UCMAQ8WVF2 138 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 DDX23Q9BUQ8 820 aaKnown RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 PABPC3Q9H361 631 aaKnown RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 LUC7LQ9NQ29 371 aaKnown RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 ZDHHC18Q9NUE0 388 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 PPP1R1BQ9UD71 204 aaPredicted RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 TULP1O00294 542 aaPredicted RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 MYL1P05976 194 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 PPP4CP60510 307 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 LAMB3Q13751 1172 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 IFI16Q16666 785 aaKnown RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 LONRF1Q17RB8 773 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 EIF1ADQ8N9N8 165 aaKnown RBP17.58■□□□□ 0.4
LINC00554-201ENST00000564841 SUPT20HQ8NEM7 779 aa17.58■□□□□ 0.4
LINC00554-201ENST00000564841 SLMAPQ14BN4 828 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 AOC3Q16853 763 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 ALKBH5Q6P6C2 394 aaKnown RBP17.57■□□□□ 0.4
LINC00554-201ENST00000564841 TMEM154Q6P9G4 183 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 CCDC25Q86WR0 208 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 COA1Q9GZY4 146 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 CTNNAL1Q9UBT7 734 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 RPTORQ8N122 1335 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 CALML3P27482 149 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 RANBP1P43487 201 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 SESN3P58005 492 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 KLRC3Q07444 240 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 SLC5A9Q2M3M2 681 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 DCAF12L1Q5VU92 463 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 ASRGL1Q7L266 308 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 EXOC3L1Q86VI1 746 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 ZFPM1Q8IX07 1006 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 TBCKQ8TEA7 893 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 IQCDQ96DY2 449 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 DLGAP2Q9P1A6 1054 aa17.57■□□□□ 0.4
LINC00554-201ENST00000564841 LRRD1A4D1F6 860 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 HIP1RO75146 1068 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 OAS1P00973 400 aaKnown RBP17.56■□□□□ 0.4
LINC00554-201ENST00000564841 FERP16591 822 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 PDE6CP51160 858 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 GRB10Q13322 594 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 SHROOM1Q2M3G4 852 aaPredicted RBP17.56■□□□□ 0.4
LINC00554-201ENST00000564841 ZDHHC24Q6UX98 284 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 SV2BQ7L1I2 683 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 TTC8Q8TAM2 541 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 SPIRE2Q8WWL2 714 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 FAM114A2Q9NRY5 505 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 NAGPAQ9UK23 515 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 M0R2N6 131 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 OR52Z1P0C646 297 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 PCP11498 1178 aaKnown RBP17.56■□□□□ 0.4
LINC00554-201ENST00000564841 EIF3BP55884 814 aaKnown RBP17.56■□□□□ 0.4
LINC00554-201ENST00000564841 DR1Q01658 176 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 MPP2Q14168 576 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 GJB7Q6PEY0 223 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 GPCPD1Q9NPB8 672 aa17.56■□□□□ 0.4
LINC00554-201ENST00000564841 KCNK9Q9NPC2 374 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms