RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 SRRDQ9UH36 339 aa12.37□□□□□ -0.43
SNX29-204ENST00000564791 DENND3A2RUS2 1198 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 LGALS16A8MUM7 142 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 GAS2O43903 313 aaKnown RBP12.36□□□□□ -0.43
SNX29-204ENST00000564791 C22orf31O95567 290 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 INSRRP14616 1297 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 ELNP15502 786 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 NAMPTP43490 491 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 IGBP1P78318 339 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
SNX29-204ENST00000564791 NFIL3Q16649 462 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 CCDC40Q4G0X9 1142 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 HS2ST1Q7LGA3 356 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 FILIP1Q7Z7B0 1213 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 EXOC8Q8IYI6 725 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 LRRC71Q8N4P6 559 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 HVCN1Q96D96 273 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 ZBTB10Q96DT7 871 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 SUGCTQ9HAC7 445 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 ARHGAP28Q9P2N2 729 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 TBX20Q9UMR3 447 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 Q9Y3F1 56 aa12.36□□□□□ -0.43
SNX29-204ENST00000564791 COL1A2P08123 1366 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 TISP43B9A030 160 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 GNA14O95837 355 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 RPL13P26373 211 aaKnown RBP12.35□□□□□ -0.43
SNX29-204ENST00000564791 PBX1P40424 430 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 CPT1AP50416 773 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 BEX3Q00994 111 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 CACNB2Q08289 660 aaPredicted RBP12.35□□□□□ -0.43
SNX29-204ENST00000564791 CAPSQ13938 189 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 MIIPQ5JXC2 388 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 IER5Q5VY09 327 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 TAS1R3Q7RTX0 852 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 MAP4K3Q8IVH8 894 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 GOLGA5Q8TBA6 731 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 TCP11Q8WWU5 503 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
SNX29-204ENST00000564791 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
SNX29-204ENST00000564791 SAGE1Q9NXZ1 904 aa12.35□□□□□ -0.43
SNX29-204ENST00000564791 LRRIQ4A6NIV6 560 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 H0YCG3 227 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 PES1O00541 588 aaKnown RBP12.34□□□□□ -0.43
SNX29-204ENST00000564791 SLC16A3O15427 465 aaKnown RBP12.34□□□□□ -0.43
SNX29-204ENST00000564791 ADCY3O60266 1144 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 FKTNO75072 461 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 DUSP11O75319 330 aaKnown RBP12.34□□□□□ -0.43
SNX29-204ENST00000564791 F2P00734 622 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 TPM2P07951 284 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 MYL3P08590 195 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 HOXD10P28358 340 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 CNGA1P29973 690 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 CASP4P49662 377 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 CYP2J2P51589 502 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 CLCN3P51790 818 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 MARSP56192 900 aaKnown RBP12.34□□□□□ -0.43
SNX29-204ENST00000564791 UBXN1Q04323 297 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 MAN2A1Q16706 1144 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 HS1BP3Q53T59 392 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 DEPTORQ8TB45 409 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
SNX29-204ENST00000564791 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
SNX29-204ENST00000564791 KAT2BQ92831 832 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 DMAC2Q9NW81 257 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 IMPACTQ9P2X3 320 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 KCNG1Q9UIX4 513 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 EXOC7Q9UPT5 735 aa12.34□□□□□ -0.43
SNX29-204ENST00000564791 MYADML2A6NDP7 307 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 SEPT4O43236 478 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 AKAP3O75969 853 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.43
SNX29-204ENST00000564791 KLRC1P26715 233 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 GRIK4Q16099 956 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 FSCN1Q16658 493 aaKnown RBP12.33□□□□□ -0.43
SNX29-204ENST00000564791 BRDTQ58F21 947 aaPredicted RBP12.33□□□□□ -0.43
SNX29-204ENST00000564791 CEP135Q66GS9 1140 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 SPECC1LQ69YQ0 1117 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 EFCAB12Q6NXP0 572 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 TRIM59Q8IWR1 403 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 METTL13Q8N6R0 699 aa12.33□□□□□ -0.43
SNX29-204ENST00000564791 ZNF296Q8WUU4 475 aaPredicted RBP12.33□□□□□ -0.43
SNX29-204ENST00000564791 ZNF830Q96NB3 372 aaPredicted RBP12.33□□□□□ -0.43
SNX29-204ENST00000564791 CGNQ9P2M7 1197 aaKnown RBP12.33□□□□□ -0.43
SNX29-204ENST00000564791 SUCLA2Q9P2R7 463 aaPredicted RBP12.33□□□□□ -0.43
SNX29-204ENST00000564791 TRIP12Q14669 1992 aaPredicted RBP12.33□□□□□ -0.44
SNX29-204ENST00000564791 ANKRD63C9JTQ0 380 aa12.33□□□□□ -0.44
SNX29-204ENST00000564791 MAGEB2O15479 319 aa12.33□□□□□ -0.44
SNX29-204ENST00000564791 HMGCRP04035 888 aa12.33□□□□□ -0.44
SNX29-204ENST00000564791 EPB41P11171 864 aaKnown RBP12.33□□□□□ -0.44
SNX29-204ENST00000564791 CCND3P30281 292 aaPredicted RBP12.33□□□□□ -0.44
SNX29-204ENST00000564791 ABCD1P33897 745 aa12.33□□□□□ -0.44
SNX29-204ENST00000564791 PSEN2P49810 448 aa12.33□□□□□ -0.44
SNX29-204ENST00000564791 DNM2P50570 870 aa12.33□□□□□ -0.44
SNX29-204ENST00000564791 GJA9P57773 515 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms