RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 C6orf118Q5T5N4 469 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 LRCH2Q5VUJ6 765 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 C11orf63Q6NUN7 778 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 MMS22LQ6ZRQ5 1243 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 KCTD1Q719H9 257 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 SUGP1Q8IWZ8 645 aaKnown RBP8.27□□□□□ -1.09
ATXN3-249ENST00000564606 C12orf56Q8IXR9 622 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 MICALL1Q8N3F8 863 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 GRK7Q8WTQ7 553 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 DHX38Q92620 1227 aaKnown RBP8.27□□□□□ -1.09
ATXN3-249ENST00000564606 CNKSR1Q969H4 720 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 GJD4Q96KN9 370 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-249ENST00000564606 FMO2Q99518 471 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 CCDC77Q9BR77 488 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 REEP2Q9BRK0 252 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 ROPN1BQ9BZX4 212 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-249ENST00000564606 BHMT2Q9H2M3 363 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 ROPN1Q9HAT0 212 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-249ENST00000564606 TMBIM4Q9HC24 238 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 APEX2Q9UBZ4 518 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 CNOT7Q9UIV1 285 aaKnown RBP8.27□□□□□ -1.09
ATXN3-249ENST00000564606 PLAAQ9Y263 795 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.27□□□□□ -1.09
ATXN3-249ENST00000564606 FRMPD4Q14CM0 1322 aa8.27□□□□□ -1.09
ATXN3-249ENST00000564606 FOCADQ5VW36 1801 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 LY75O60449 1722 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 QSER1Q2KHR3 1735 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 ATRNL1Q5VV63 1379 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 GMNCA6NCL1 334 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L15C9J2P7 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L13C9JLJ4 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L11C9JVI0 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L18D6R9N7 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 POLRMTO00411 1230 aaKnown RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 MEIS2O14770 477 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 EPHB6O15197 1021 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 TLR2O60603 784 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CXCR5P32302 372 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 GTF2H1P32780 548 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 LSP1P33241 339 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 FMO5P49326 533 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 ZNF131P52739 623 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 MFAP3P55082 362 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 EIF6P56537 245 aaKnown RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 JAM2P57087 298 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 PTENP60484 403 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 PPP2R2AP63151 447 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 GPC5P78333 572 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 SLC7A5Q01650 507 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 DR1Q01658 176 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CALCOCO2Q13137 446 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 NBPF9Q3BBW0 867 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 GKAP1Q5VSY0 366 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 DENND2CQ68D51 928 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 STYK1Q6J9G0 422 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 RINT1Q6NUQ1 792 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 XRRA1Q6P2D8 792 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 USP17L6PQ6QN14 398 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 KCNK18Q7Z418 384 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CCDC91Q7Z6B0 441 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 KLHL7Q8IXQ5 586 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CNPY4Q8N129 248 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 ANKRD13CQ8N6S4 541 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 GBP7Q8N8V2 638 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 LRRC57Q8N9N7 239 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 RDM1Q8NG50 284 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CCHCR1Q8TD31 782 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 LRRC15Q8TF66 581 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 U2AF1L4Q8WU68 220 aaKnown RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CRYGNQ8WXF5 182 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 SEC14L1Q92503 715 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 HPS3Q969F9 1004 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 SLC35C1Q96A29 364 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 HES6Q96HZ4 224 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CABS1Q96KC9 395 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 FOXP3Q9BZS1 431 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 VPS33BQ9H267 617 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CPVLQ9H3G5 476 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 C17orf75Q9HAS0 396 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 TBC1D22BQ9NU19 505 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 UVRAGQ9P2Y5 699 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 DBR1Q9UK59 544 aaKnown RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 FEM1BQ9UK73 627 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 DNAJC12Q9UKB3 198 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 NOC2LQ9Y3T9 749 aaKnown RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 CTDP1Q9Y5B0 961 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 PASKQ96RG2 1323 aa8.26□□□□□ -1.09
ATXN3-249ENST00000564606 ZC3H4Q9UPT8 1303 aaKnown RBP8.26□□□□□ -1.09
ATXN3-249ENST00000564606 BAZ2BQ9UIF8 2168 aaKnown RBP8.25□□□□□ -1.09
ATXN3-249ENST00000564606 THSD7AQ9UPZ6 1657 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ATAD5Q96QE3 1844 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 A0A1B0GUA9 196 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 RIMBP2O15034 1052 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ADAMTS3O15072 1205 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms