RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 THNSL1Q8IYQ7 743 aa18.78■□□□□ 0.6
CCNF-203ENST00000564236 HAS1Q92839 578 aa18.78■□□□□ 0.6
CCNF-203ENST00000564236 INO80BQ9C086 356 aaPredicted RBP18.78■□□□□ 0.6
CCNF-203ENST00000564236 CYP26B1Q9NR63 512 aa18.78■□□□□ 0.6
CCNF-203ENST00000564236 NEFLP07196 543 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 SFPQP23246 707 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCNF-203ENST00000564236 SPIRE1Q08AE8 756 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 C4orf19Q8IY42 314 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 EXOC8Q8IYI6 725 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 ABI1Q8IZP0 508 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 OXER1Q8TDS5 423 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 WASF1Q92558 559 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 TNFRSF25Q93038 417 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 ZNF558Q96NG5 402 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 DHX33Q9H6R0 707 aaKnown RBP18.77■□□□□ 0.6
CCNF-203ENST00000564236 TLE6Q9H808 572 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 NGRNQ9NPE2 291 aaKnown RBP18.77■□□□□ 0.6
CCNF-203ENST00000564236 SUCLA2Q9P2R7 463 aaPredicted RBP18.77■□□□□ 0.6
CCNF-203ENST00000564236 HCN4Q9Y3Q4 1203 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 PCDHGC5Q9Y5F6 944 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 PLXNA4Q9HCM2 1894 aa18.77■□□□□ 0.6
CCNF-203ENST00000564236 A0A087WZ62 844 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 CARNS1A5YM72 827 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 DDX11L8A8MPP1 907 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 ZNF623O75123 536 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 CSPG5O95196 566 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 FDPSP14324 419 aaKnown RBP18.76■□□□□ 0.59
CCNF-203ENST00000564236 IBSPP21815 317 aaPredicted RBP18.76■□□□□ 0.59
CCNF-203ENST00000564236 PHKA2P46019 1235 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 AK2P54819 239 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 EPHA7Q15375 998 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 CLUL1Q15846 466 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 HERC4Q5GLZ8 1057 aaPredicted RBP18.76■□□□□ 0.59
CCNF-203ENST00000564236 VN1R2Q8NFZ6 395 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 SUSD6Q92537 303 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 ZNF668Q96K58 619 aaPredicted RBP18.76■□□□□ 0.59
CCNF-203ENST00000564236 SCLT1Q96NL6 688 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 FDXACB1Q9BRP7 624 aaPredicted RBP18.76■□□□□ 0.59
CCNF-203ENST00000564236 MRPL9Q9BYD2 267 aaKnown RBP18.76■□□□□ 0.59
CCNF-203ENST00000564236 IFT122Q9HBG6 1241 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
CCNF-203ENST00000564236 WRAP73Q9P2S5 460 aaPredicted RBP18.76■□□□□ 0.59
CCNF-203ENST00000564236 PUF60Q9UHX1 559 aaKnown RBP18.76■□□□□ 0.59
CCNF-203ENST00000564236 FAM86C2PA6NEL3 165 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 GAS2O43903 313 aaKnown RBP18.75■□□□□ 0.59
CCNF-203ENST00000564236 SKIP12755 728 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 FGFR4P22455 802 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 CBX2Q14781 532 aaPredicted RBP18.75■□□□□ 0.59
CCNF-203ENST00000564236 EARS2Q5JPH6 523 aaKnown RBP18.75■□□□□ 0.59
CCNF-203ENST00000564236 PIK3AP1Q6ZUJ8 805 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 RBM23Q86U06 439 aaKnown RBP18.75■□□□□ 0.59
CCNF-203ENST00000564236 SLC39A11Q8N1S5 342 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 MICAL1Q8TDZ2 1067 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 GJB4Q9NTQ9 266 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 SPG21Q9NZD8 308 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 ORC3Q9UBD5 711 aaPredicted RBP18.75■□□□□ 0.59
CCNF-203ENST00000564236 BARX2Q9UMQ3 279 aaPredicted RBP18.75■□□□□ 0.59
CCNF-203ENST00000564236 C5orf42Q9H799 3197 aa18.75■□□□□ 0.59
CCNF-203ENST00000564236 LOC730098B7Z3J9 87 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 CCNT1O60563 726 aaKnown RBP18.74■□□□□ 0.59
CCNF-203ENST00000564236 EIF5BO60841 1220 aaKnown RBP18.74■□□□□ 0.59
CCNF-203ENST00000564236 RFC5P40937 340 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 RAB27AP51159 221 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 KRT17Q04695 432 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 RHPN2Q8IUC4 686 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 SLFN12Q8IYM2 578 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 SLC7A3Q8WY07 619 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 GTF3C6Q969F1 213 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 TCF25Q9BQ70 676 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 SH2D3AQ9BRG2 576 aa18.74■□□□□ 0.59
CCNF-203ENST00000564236 PER2O15055 1255 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 CSDE1O75534 798 aaKnown RBP18.73■□□□□ 0.59
CCNF-203ENST00000564236 NPEPPSP55786 919 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 ME3Q16798 604 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 PLA2G4FQ68DD2 849 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 FAM122AQ96E09 287 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 LXNQ9BS40 222 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 S1PR5Q9H228 398 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 AGPAT5Q9NUQ2 364 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 FAM105AQ9NUU6 356 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 USP15Q9Y4E8 981 aaPredicted RBP18.73■□□□□ 0.59
CCNF-203ENST00000564236 COL4A3BPQ9Y5P4 624 aa18.73■□□□□ 0.59
CCNF-203ENST00000564236 LYPLA2O95372 231 aa18.72■□□□□ 0.59
CCNF-203ENST00000564236 YWHABP31946 246 aaKnown RBP18.72■□□□□ 0.59
CCNF-203ENST00000564236 KRT2P35908 639 aa18.72■□□□□ 0.59
CCNF-203ENST00000564236 SRGAP1Q7Z6B7 1085 aa18.72■□□□□ 0.59
CCNF-203ENST00000564236 RNF135Q8IUD6 432 aa18.72■□□□□ 0.59
CCNF-203ENST00000564236 KSR1Q8IVT5 923 aa18.72■□□□□ 0.59
CCNF-203ENST00000564236 ZNF579Q8NAF0 562 aaKnown RBP18.72■□□□□ 0.59
CCNF-203ENST00000564236 NSUN7Q8NE18 718 aaKnown RBP18.72■□□□□ 0.59
CCNF-203ENST00000564236 HELQQ8TDG4 1101 aa18.72■□□□□ 0.59
CCNF-203ENST00000564236 PSPC1Q8WXF1 523 aaKnown RBP18.72■□□□□ 0.59
CCNF-203ENST00000564236 CEP170P1Q96L14 293 aa18.72■□□□□ 0.59
CCNF-203ENST00000564236 PHF7Q9BWX1 381 aaPredicted RBP18.72■□□□□ 0.59
CCNF-203ENST00000564236 ZSWIM4Q9H7M6 989 aa18.72■□□□□ 0.59
CCNF-203ENST00000564236 PIN4Q9Y237 131 aaKnown RBP18.72■□□□□ 0.59
CCNF-203ENST00000564236 HIDE1A8MVS5 230 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 ASAP2O43150 1006 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 LARGE1O95461 756 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms