RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 MBLAC1A4D2B0 266 aaPredicted RBP14.12□□□□□ -0.15
CLK3-214ENST00000564096 LRRIQ4A6NIV6 560 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 SFI1A8K8P3 1242 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 PPP1R3GB7ZBB8 358 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 MYBP10242 640 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 CCNE1P24864 410 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 NPTX2P47972 431 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 CLCN3P51790 818 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 IRX5P78411 483 aaPredicted RBP14.12□□□□□ -0.15
CLK3-214ENST00000564096 CDC42EP1Q00587 391 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 PTPN11Q06124 597 aaPredicted RBP14.12□□□□□ -0.15
CLK3-214ENST00000564096 FOXR2Q6PJQ5 311 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 HS2ST1Q7LGA3 356 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 ZNF720Q7Z2F6 126 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 SESTD1Q86VW0 696 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 ZNF710Q8N1W2 664 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 GOLGA5Q8TBA6 731 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 ENOX1Q8TC92 643 aaKnown RBP14.12□□□□□ -0.15
CLK3-214ENST00000564096 ASAP3Q8TDY4 903 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 P2RX5Q93086 422 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 ZNF333Q96JL9 665 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 SCLT1Q96NL6 688 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 DEFB118Q96PH6 123 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 SETD4Q9NVD3 440 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 GTF2IRD1Q9UHL9 959 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 MAPK8IP1Q9UQF2 711 aa14.12□□□□□ -0.15
CLK3-214ENST00000564096 WDR81Q562E7 1941 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 FRMPD3Q5JV73 1810 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 A0A0U1RQG5 324 aaPredicted RBP14.11□□□□□ -0.15
CLK3-214ENST00000564096 SMIM35A0A1B0GVV1 85 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 SLC16A4O15374 487 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 CALUO43852 315 aaPredicted RBP14.11□□□□□ -0.15
CLK3-214ENST00000564096 FGFR1OPO95684 399 aaKnown RBP14.11□□□□□ -0.15
CLK3-214ENST00000564096 ATXN8OSP0DMR3 200 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 CYP2C9P11712 490 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 CAPN2P17655 700 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 GLRA2P23416 452 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 NMT1P30419 496 aaKnown RBP14.11□□□□□ -0.15
CLK3-214ENST00000564096 HOXC8P31273 242 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 PHKA2P46019 1235 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 EFNA5P52803 228 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 SOX10P56693 466 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 STRN3Q13033 797 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 NBPF20Q3BBV1 942 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 EPM2AIP1Q7L775 607 aaPredicted RBP14.11□□□□□ -0.15
CLK3-214ENST00000564096 HAUS6Q7Z4H7 955 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 RSPH3Q86UC2 560 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 GAS2L3Q86XJ1 694 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 RHPN2Q8IUC4 686 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 SYCP3Q8IZU3 236 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
CLK3-214ENST00000564096 SCFD1Q8WVM8 642 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 BSNDQ8WZ55 320 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 ACCSQ96QU6 501 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 PRDM10Q9NQV6 1147 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 STARD7Q9NQZ5 370 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 ARHGAP28Q9P2N2 729 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 HDAC6Q9UBN7 1215 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 PHF24Q9UPV7 400 aa14.11□□□□□ -0.15
CLK3-214ENST00000564096 A0A1W2PQ45 241 aaPredicted RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 A0A1W2PQY0 241 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 DENND3A2RUS2 1198 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 M0QZ92 97 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 PPP1R37O75864 691 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 MYCP01106 439 aaPredicted RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 MRE11P49959 708 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 CASP5P51878 434 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 GTF2BQ00403 316 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 LAMTOR4Q0VGL1 99 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 ITGA7Q13683 1181 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 CAPSQ13938 189 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 MTFR1Q15390 333 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 KNOP1Q1ED39 458 aaKnown RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 SPATA1Q5VX52 437 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 CDCA2Q69YH5 1023 aaPredicted RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 LUZP1Q86V48 1076 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 ZNF410Q86VK4 478 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 MAP4K3Q8IVH8 894 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 NELFCDQ8IXH7 590 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 LINC01465Q8N7H1 131 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 RNF149Q8NC42 400 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 TMEM161BQ8NDZ6 487 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 ANKRD20A12PQ8NF67 263 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 PRPF31Q8WWY3 499 aaKnown RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 KCNN1Q92952 543 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 NLRP4Q96MN2 994 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 FIZ1Q96SL8 496 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 NTPCRQ9BSD7 190 aaKnown RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 NFKBIZQ9BYH8 718 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 FGFBP2Q9BYJ0 223 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 RBSNQ9H1K0 784 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 POLD4Q9HCU8 107 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 TYW1Q9NV66 732 aaKnown RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 CGNQ9P2M7 1197 aaKnown RBP14.1□□□□□ -0.15
CLK3-214ENST00000564096 OGDHLQ9ULD0 1010 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 NOD1Q9Y239 953 aa14.1□□□□□ -0.15
CLK3-214ENST00000564096 FSD2A1L4K1 749 aa14.09□□□□□ -0.15
CLK3-214ENST00000564096 PRPF6O94906 941 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms