RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 CTNNB1P35222 781 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 TFDP1Q14186 410 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 PTPROQ16827 1216 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 BRAPQ7Z569 592 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 SRGAP1Q7Z6B7 1085 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 FERMT3Q86UX7 667 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 PIGOQ8TEQ8 1089 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 PRPF31Q8WWY3 499 aaKnown RBP22.11■■□□□ 1.13
CMTM3-207ENST00000564060 CLP1Q92989 425 aaKnown RBP22.11■■□□□ 1.13
CMTM3-207ENST00000564060 INTS4Q96HW7 963 aaKnown RBP22.11■■□□□ 1.13
CMTM3-207ENST00000564060 PLVAPQ9BX97 442 aa22.11■■□□□ 1.13
CMTM3-207ENST00000564060 C5orf67F2Z3F1 127 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 H3BNC9 293 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 K7ELQ4 463 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-207ENST00000564060 SKIP12755 728 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 PHKA2P46019 1235 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 FAM189BP81408 668 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 LAMTOR4Q0VGL1 99 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 PCBP1Q15365 356 aaKnown RBP eCLIP22.1■■□□□ 1.13
CMTM3-207ENST00000564060 CCDC85BQ15834 202 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-207ENST00000564060 DTHD1Q6ZMT9 781 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 CATSPER4Q7RTX7 472 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 KSR1Q8IVT5 923 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 IGSF22Q8N9C0 903 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 MCPH1Q8NEM0 835 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 C11orf84Q9BUA3 381 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-207ENST00000564060 IFT122Q9HBG6 1241 aa22.1■■□□□ 1.13
CMTM3-207ENST00000564060 EYSQ5T1H1 3165 aa22.09■■□□□ 1.13
CMTM3-207ENST00000564060 SRGAP2CP0DJJ0 459 aa22.09■■□□□ 1.13
CMTM3-207ENST00000564060 BMPR1AP36894 532 aa22.09■■□□□ 1.13
CMTM3-207ENST00000564060 CCT6AP40227 531 aaKnown RBP22.09■■□□□ 1.13
CMTM3-207ENST00000564060 GPM6BQ13491 265 aa22.09■■□□□ 1.13
CMTM3-207ENST00000564060 RNF149Q8NC42 400 aa22.09■■□□□ 1.13
CMTM3-207ENST00000564060 RSPH1Q8WYR4 309 aa22.09■■□□□ 1.13
CMTM3-207ENST00000564060 XPNPEP1Q9NQW7 623 aa22.09■■□□□ 1.13
CMTM3-207ENST00000564060 A0A0U1RQF3 1178 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 EOMESO95936 686 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 BMP15O95972 392 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 FGFR4P22455 802 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 ATP2C1P98194 919 aaPredicted RBP22.08■■□□□ 1.13
CMTM3-207ENST00000564060 POU5F1BQ06416 359 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 PAN2Q504Q3 1202 aaKnown RBP22.08■■□□□ 1.13
CMTM3-207ENST00000564060 NAALADL2Q58DX5 795 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 KRT79Q5XKE5 535 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 TWF2Q6IBS0 349 aaKnown RBP22.08■■□□□ 1.13
CMTM3-207ENST00000564060 POTEGQ6S5H5 508 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 ABI1Q8IZP0 508 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 SNX29Q8TEQ0 813 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 TRAIPQ9BWF2 469 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 LMAN2LQ9H0V9 348 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 AAASQ9NRG9 546 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 THEGQ9P2T0 379 aa22.08■■□□□ 1.13
CMTM3-207ENST00000564060 PIN4Q9Y237 131 aaKnown RBP22.08■■□□□ 1.13
CMTM3-207ENST00000564060 VPS37CA5D8V6 355 aaPredicted RBP22.07■■□□□ 1.12
CMTM3-207ENST00000564060 ARHGEF35A5YM69 484 aa22.07■■□□□ 1.12
CMTM3-207ENST00000564060 USO1O60763 962 aaKnown RBP22.07■■□□□ 1.12
CMTM3-207ENST00000564060 CSDE1O75534 798 aaKnown RBP22.07■■□□□ 1.12
CMTM3-207ENST00000564060 RAB27AP51159 221 aa22.07■■□□□ 1.12
CMTM3-207ENST00000564060 ARL6IP4Q66PJ3 421 aaKnown RBP22.07■■□□□ 1.12
CMTM3-207ENST00000564060 ECHDC2Q86YB7 292 aa22.07■■□□□ 1.12
CMTM3-207ENST00000564060 P2RX5Q93086 422 aa22.07■■□□□ 1.12
CMTM3-207ENST00000564060 MRPL38Q96DV4 380 aaKnown RBP22.07■■□□□ 1.12
CMTM3-207ENST00000564060 TMEM117Q9H0C3 514 aa22.07■■□□□ 1.12
CMTM3-207ENST00000564060 AGPAT5Q9NUQ2 364 aa22.07■■□□□ 1.12
CMTM3-207ENST00000564060 MRPL42Q9Y6G3 142 aaKnown RBP22.07■■□□□ 1.12
CMTM3-207ENST00000564060 ATG2AQ2TAZ0 1938 aa22.07■■□□□ 1.12
CMTM3-207ENST00000564060 TBKBP1A7MCY6 615 aa22.06■■□□□ 1.12
CMTM3-207ENST00000564060 ERLIN2O94905 339 aa22.06■■□□□ 1.12
CMTM3-207ENST00000564060 LINC00271P0C7V0 271 aa22.06■■□□□ 1.12
CMTM3-207ENST00000564060 ARL2P36404 184 aa22.06■■□□□ 1.12
CMTM3-207ENST00000564060 NCBP1Q09161 790 aaKnown RBP22.06■■□□□ 1.12
CMTM3-207ENST00000564060 SKIV2LQ15477 1246 aaKnown RBP22.06■■□□□ 1.12
CMTM3-207ENST00000564060 TIGD5Q53EQ6 642 aa22.06■■□□□ 1.12
CMTM3-207ENST00000564060 SNX21Q969T3 373 aa22.06■■□□□ 1.12
CMTM3-207ENST00000564060 NFKBIZQ9BYH8 718 aa22.06■■□□□ 1.12
CMTM3-207ENST00000564060 PLXNA4Q9HCM2 1894 aa22.05■■□□□ 1.12
CMTM3-207ENST00000564060 PTENP60484 403 aa22.05■■□□□ 1.12
CMTM3-207ENST00000564060 CSPP1Q1MSJ5 1256 aa22.05■■□□□ 1.12
CMTM3-207ENST00000564060 SPOUT1Q5T280 376 aaKnown RBP22.05■■□□□ 1.12
CMTM3-207ENST00000564060 FAM102BQ5T8I3 360 aa22.05■■□□□ 1.12
CMTM3-207ENST00000564060 IFNLR1Q8IU57 520 aaPredicted RBP22.05■■□□□ 1.12
CMTM3-207ENST00000564060 POLR3FQ9H1D9 316 aaPredicted RBP22.05■■□□□ 1.12
CMTM3-207ENST00000564060 MYH11P35749 1972 aa22.05■■□□□ 1.12
CMTM3-207ENST00000564060 AXLP30530 894 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 GATMP50440 423 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 PADI6Q6TGC4 694 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 HSCBQ8IWL3 235 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 LRRC43Q8N309 656 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 KCTD17Q8N5Z5 321 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 RNF169Q8NCN4 708 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 ATXN2LQ8WWM7 1075 aaKnown RBP22.04■■□□□ 1.12
CMTM3-207ENST00000564060 MRPL9Q9BYD2 267 aaKnown RBP22.04■■□□□ 1.12
CMTM3-207ENST00000564060 DDX19AQ9NUU7 478 aaKnown RBP22.04■■□□□ 1.12
CMTM3-207ENST00000564060 KIAA1024Q9UPX6 916 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 PCDHB12Q9Y5F1 795 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 MYH15Q9Y2K3 1946 aa22.04■■□□□ 1.12
CMTM3-207ENST00000564060 FGFR1P11362 822 aa22.03■■□□□ 1.12
CMTM3-207ENST00000564060 CAPSQ13938 189 aa22.03■■□□□ 1.12
CMTM3-207ENST00000564060 ZNF598Q86UK7 904 aaKnown RBP22.03■■□□□ 1.12
CMTM3-207ENST00000564060 ASAP3Q8TDY4 903 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms