RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 TLR9Q9NR96 1032 aa28.17■■■□□ 2.1
SPG7-208ENST00000563783 A0A087WZ62 844 aa28.16■■■□□ 2.1
SPG7-208ENST00000563783 LYPLA2O95372 231 aa28.16■■■□□ 2.1
SPG7-208ENST00000563783 RAB27AP51159 221 aa28.16■■■□□ 2.1
SPG7-208ENST00000563783 SMAD4Q13485 552 aaKnown RBP28.16■■■□□ 2.1
SPG7-208ENST00000563783 SMAD2Q15796 467 aaKnown RBP28.16■■■□□ 2.1
SPG7-208ENST00000563783 RHPN2Q8IUC4 686 aa28.16■■■□□ 2.1
SPG7-208ENST00000563783 THNSL1Q8IYQ7 743 aa28.16■■■□□ 2.1
SPG7-208ENST00000563783 FDXACB1Q9BRP7 624 aaPredicted RBP28.16■■■□□ 2.1
SPG7-208ENST00000563783 YWHABP31946 246 aaKnown RBP28.15■■■□□ 2.1
SPG7-208ENST00000563783 PCBP1Q15365 356 aaKnown RBP eCLIP28.15■■■□□ 2.1
SPG7-208ENST00000563783 EP400NLQ6ZTU2 488 aa28.15■■■□□ 2.1
SPG7-208ENST00000563783 DIS3L2Q8IYB7 885 aaKnown RBP28.15■■■□□ 2.1
SPG7-208ENST00000563783 TCP11Q8WWU5 503 aa28.15■■■□□ 2.1
SPG7-208ENST00000563783 CEP170P1Q96L14 293 aa28.15■■■□□ 2.1
SPG7-208ENST00000563783 LLPHQ9BRT6 129 aaKnown RBP28.15■■■□□ 2.1
SPG7-208ENST00000563783 LIMCH1Q9UPQ0 1083 aa28.15■■■□□ 2.1
SPG7-208ENST00000563783 COL4A3BPQ9Y5P4 624 aa28.15■■■□□ 2.1
SPG7-208ENST00000563783 PI4K2BG5E9Z4 385 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 FSCN2O14926 492 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 ASAP2O43150 1006 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 ZNF623O75123 536 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 TBX10O75333 385 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 EYA4O95677 639 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 ATF7P17544 494 aaPredicted RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 IBSPP21815 317 aaPredicted RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 IRS1P35568 1242 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 PHKA2P46019 1235 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 POLGP54098 1239 aaPredicted RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 CLLU1OSQ5K130 101 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 PLA2G4FQ68DD2 849 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 SRGAP1Q7Z6B7 1085 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 ADHFE1Q8IWW8 467 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 PSPC1Q8WXF1 523 aaKnown RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 MRPS27Q92552 414 aaKnown RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 ZNF668Q96K58 619 aaPredicted RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 MSLNLQ96KJ4 702 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 ZNF558Q96NG5 402 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 POP1Q99575 1024 aaKnown RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 SH2D3AQ9BRG2 576 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 IFT122Q9HBG6 1241 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 CD320Q9NPF0 282 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 WRAP73Q9P2S5 460 aaPredicted RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 PUF60Q9UHX1 559 aaKnown RBP28.14■■■□□ 2.1
SPG7-208ENST00000563783 CD207Q9UJ71 328 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 PCDHA12Q9UN75 941 aa28.14■■■□□ 2.1
SPG7-208ENST00000563783 FAM205CA6NFA0 338 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 C19orf67A6NJJ6 358 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 BTBD18B2RXH4 712 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 NPEPPSP55786 919 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 ZP2Q05996 745 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 COASYQ13057 564 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 KCNT2Q6UVM3 1135 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 LRRC55Q6ZSA7 311 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 HSD17B14Q9BPX1 270 aa28.13■■■□□ 2.09
SPG7-208ENST00000563783 MBTPS2O43462 519 aa28.12■■■□□ 2.09
SPG7-208ENST00000563783 JAK2O60674 1132 aa28.12■■■□□ 2.09
SPG7-208ENST00000563783 SEC24BO95487 1268 aa28.12■■■□□ 2.09
SPG7-208ENST00000563783 DLX2Q07687 328 aaPredicted RBP28.12■■■□□ 2.09
SPG7-208ENST00000563783 ORC2Q13416 577 aaPredicted RBP28.12■■■□□ 2.09
SPG7-208ENST00000563783 CALCRLQ16602 461 aa28.12■■■□□ 2.09
SPG7-208ENST00000563783 NCAPH2Q6IBW4 605 aa28.12■■■□□ 2.09
SPG7-208ENST00000563783 ADGRD2Q7Z7M1 963 aa28.12■■■□□ 2.09
SPG7-208ENST00000563783 NGRNQ9NPE2 291 aaKnown RBP28.12■■■□□ 2.09
SPG7-208ENST00000563783 AGPAT5Q9NUQ2 364 aa28.12■■■□□ 2.09
SPG7-208ENST00000563783 NEMFO60524 1076 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 GPR37L1O60883 481 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 FGFR4P22455 802 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 GTF2F1P35269 517 aaKnown RBP eCLIP28.11■■■□□ 2.09
SPG7-208ENST00000563783 KRT17Q04695 432 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 SAFBQ15424 915 aaKnown RBP eCLIP28.11■■■□□ 2.09
SPG7-208ENST00000563783 TWF2Q6IBS0 349 aaKnown RBP28.11■■■□□ 2.09
SPG7-208ENST00000563783 CATSPER4Q7RTX7 472 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 DYDC2Q96IM9 177 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 NLRP4Q96MN2 994 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 IGFLR1Q9H665 355 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 TLE6Q9H808 572 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 ANKEF1Q9NU02 776 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 SPG21Q9NZD8 308 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 RGL1Q9NZL6 768 aa28.11■■■□□ 2.09
SPG7-208ENST00000563783 PIN4Q9Y237 131 aaKnown RBP28.11■■■□□ 2.09
SPG7-208ENST00000563783 SLITRK3O94933 977 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 COL9A1P20849 921 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 NRIP1P48552 1158 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 NDUFV1P49821 464 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 POU5F1BQ06416 359 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 ST3GAL1Q11201 340 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 MXD4Q14582 209 aaPredicted RBP28.1■■■□□ 2.09
SPG7-208ENST00000563783 EMC2Q15006 297 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 SMRP1Q8NCR6 262 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 PRPF31Q8WWY3 499 aaKnown RBP28.1■■■□□ 2.09
SPG7-208ENST00000563783 ZSCAN31Q96LW9 406 aaPredicted RBP28.1■■■□□ 2.09
SPG7-208ENST00000563783 MTMR9Q96QG7 549 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 EPHX3Q9H6B9 360 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 TTC12Q9H892 705 aaPredicted RBP28.1■■■□□ 2.09
SPG7-208ENST00000563783 FAM105AQ9NUU6 356 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 HCSTQ9UBK5 93 aa28.1■■■□□ 2.09
SPG7-208ENST00000563783 LINC01565O15544 149 aa28.09■■■□□ 2.09
SPG7-208ENST00000563783 CSDE1O75534 798 aaKnown RBP28.09■■■□□ 2.09
SPG7-208ENST00000563783 XRCC6P12956 609 aaKnown RBP eCLIP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms