RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 NLRP7Q8WX94 980 aa16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 C5orf42Q9H799 3197 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 A0A0U1RQF3 1178 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 LAD1O00515 517 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 DGAT1O75907 488 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 BMPR1AP36894 532 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 DNM2P50570 870 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 POLGP54098 1239 aaPredicted RBP16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 CAMK1Q14012 370 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 AMHR2Q16671 573 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 RILPL1Q5EBL4 403 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 ECHDC2Q86YB7 292 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 FIBCD1Q8N539 461 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 SLC17A8Q8NDX2 589 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 FBXO22Q8NEZ5 403 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 PSPC1Q8WXF1 523 aaKnown RBP16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 SNX21Q969T3 373 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 INTS4Q96HW7 963 aaKnown RBP16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 GCOM2Q9BZD3 368 aaPredicted RBP16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 CWH43Q9H720 699 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 CHST12Q9NRB3 414 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 BMP2KQ9NSY1 1161 aaPredicted RBP16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 HCSTQ9UBK5 93 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 BDP1A6H8Y1 2624 aa16.5■□□□□ 0.23
RPUSD1-204ENST00000563560 PP2D1A8MPX8 630 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 STAG3L1P0CL83 205 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 GLRA2P23416 452 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 PTENP60484 403 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 POU5F1BQ06416 359 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 GNL2Q13823 731 aaKnown RBP16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 CAPSQ13938 189 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 COL19A1Q14993 1142 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 CLLU1OSQ5K130 101 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 LARP1BQ659C4 914 aaKnown RBP16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 LRRC55Q6ZSA7 311 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 TCP11Q8WWU5 503 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 NLRP4Q96MN2 994 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 CASD1Q96PB1 797 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 MTRQ99707 1265 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 NFKBIZQ9BYH8 718 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 AGPAT5Q9NUQ2 364 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 MYH11P35749 1972 aa16.49■□□□□ 0.23
RPUSD1-204ENST00000563560 NCOR1O75376 2440 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 DENND3A2RUS2 1198 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 ASAP2O43150 1006 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 RB1P06400 928 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 FGFR1P11362 822 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 BTG3Q14201 252 aaPredicted RBP16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 CCDC85BQ15834 202 aaPredicted RBP16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 HYIQ5T013 277 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 UBXN11Q5T124 520 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 KCNK18Q7Z418 384 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 SRGAP1Q7Z6B7 1085 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 NACC1Q96RE7 527 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 ATP6V0A4Q9HBG4 840 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 LRWD1Q9UFC0 647 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 PCDHB7Q9Y5E2 793 aa16.48■□□□□ 0.23
RPUSD1-204ENST00000563560 MEIS3P2A8K0S8 358 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 K7ELQ4 463 aaPredicted RBP16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 GRM6O15303 877 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 ZNF623O75123 536 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 SFPQP23246 707 aaKnown RBP eCLIP16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 DNAJB1P25685 340 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 PHKA2P46019 1235 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 MBTD1Q05BQ5 628 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 RESTQ13127 1097 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 MCTP1Q6DN14 999 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 BSNDQ8WZ55 320 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 P2RX5Q93086 422 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 MRPL38Q96DV4 380 aaKnown RBP16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 PLVAPQ9BX97 442 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 TDRD15B5MCY1 1934 aaKnown RBP16.47■□□□□ 0.23
RPUSD1-204ENST00000563560 H3BQV1 296 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 EOMESO95936 686 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 ITGB1P05556 798 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 SRGAP2CP0DJJ0 459 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 SYT1P21579 422 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 CDC25AP30304 524 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 GPM6BQ13491 265 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 MXD4Q14582 209 aaPredicted RBP16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 PAN2Q504Q3 1202 aaKnown RBP16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 ARL6IP4Q66PJ3 421 aaKnown RBP16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 CDCA2Q69YH5 1023 aaPredicted RBP16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 RNF149Q8NC42 400 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 LRRC15Q8TF66 581 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 PNMA5Q96PV4 448 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 INO80BQ9C086 356 aaPredicted RBP16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 RWDD3Q9Y3V2 267 aa16.46■□□□□ 0.23
RPUSD1-204ENST00000563560 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 TSPAN1O60635 241 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 USO1O60763 962 aaKnown RBP16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 ZSCAN20P17040 1043 aaPredicted RBP16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 CYP11B2P19099 503 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 CTNNB1P35222 781 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 NAALADL2Q58DX5 795 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
RPUSD1-204ENST00000563560 PADI6Q6TGC4 694 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms