RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 XPNPEP1Q9NQW7 623 aa21.21■□□□□ 0.99
TRADD-203ENST00000563348 BMP2KQ9NSY1 1161 aaPredicted RBP21.21■□□□□ 0.99
TRADD-203ENST00000563348 PCDHB6Q9Y5E3 794 aa21.21■□□□□ 0.99
TRADD-203ENST00000563348 A0A087WWV3 80 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 A0A0U1RQF3 1178 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 H3BQV1 296 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 DLL1O00548 723 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 MED24O75448 989 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 DGAT1O75907 488 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 SRGAP2CP0DJJ0 459 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 RARRES1P49788 294 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 FXR2P51116 673 aaKnown RBP eCLIP21.2■□□□□ 0.98
TRADD-203ENST00000563348 PTGDRQ13258 359 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 FERMT3Q86UX7 667 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 ECHDC2Q86YB7 292 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 ERMNQ8TAM6 284 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 NACC1Q96RE7 527 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 C11orf84Q9BUA3 381 aaPredicted RBP21.2■□□□□ 0.98
TRADD-203ENST00000563348 DACT1Q9NYF0 836 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 NCOR1O75376 2440 aa21.2■□□□□ 0.98
TRADD-203ENST00000563348 TBKBP1A7MCY6 615 aa21.19■□□□□ 0.98
TRADD-203ENST00000563348 RPA1P27694 616 aa21.19■□□□□ 0.98
TRADD-203ENST00000563348 CUL4AQ13619 759 aa21.19■□□□□ 0.98
TRADD-203ENST00000563348 PDIA5Q14554 519 aa21.19■□□□□ 0.98
TRADD-203ENST00000563348 SRGAP1Q7Z6B7 1085 aa21.19■□□□□ 0.98
TRADD-203ENST00000563348 TRAIPQ9BWF2 469 aa21.19■□□□□ 0.98
TRADD-203ENST00000563348 VCANP13611 3396 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 HOXA2O43364 376 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 EOMESO95936 686 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 FGFR1P11362 822 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 MRPS5P82675 430 aaKnown RBP21.18■□□□□ 0.98
TRADD-203ENST00000563348 MXD4Q14582 209 aaPredicted RBP21.18■□□□□ 0.98
TRADD-203ENST00000563348 NAALADL2Q58DX5 795 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 RILPL1Q5EBL4 403 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 LARP1BQ659C4 914 aaKnown RBP21.18■□□□□ 0.98
TRADD-203ENST00000563348 CATSPER4Q7RTX7 472 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 ZNF598Q86UK7 904 aaKnown RBP21.18■□□□□ 0.98
TRADD-203ENST00000563348 P2RX5Q93086 422 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 CCDC43Q96MW1 224 aaKnown RBP21.18■□□□□ 0.98
TRADD-203ENST00000563348 TMEM117Q9H0C3 514 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 LMAN2LQ9H0V9 348 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.18■□□□□ 0.98
TRADD-203ENST00000563348 DBR1Q9UK59 544 aaKnown RBP21.18■□□□□ 0.98
TRADD-203ENST00000563348 COG5Q9UP83 839 aa21.18■□□□□ 0.98
TRADD-203ENST00000563348 LAD1O00515 517 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 GRM6O15303 877 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 MUTP22033 750 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 ARL2P36404 184 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 POU5F1BQ06416 359 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 TJAP1Q5JTD0 557 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 RNF149Q8NC42 400 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 ASB2Q96Q27 587 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 COL25A1Q9BXS0 654 aaPredicted RBP21.17■□□□□ 0.98
TRADD-203ENST00000563348 MINDY3Q9H8M7 445 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 RNF19AQ9NV58 838 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 LRWD1Q9UFC0 647 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 PLAGL2Q9UPG8 496 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 PIN4Q9Y237 131 aaKnown RBP21.17■□□□□ 0.98
TRADD-203ENST00000563348 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
TRADD-203ENST00000563348 HAUS3Q68CZ6 603 aa21.16■□□□□ 0.98
TRADD-203ENST00000563348 IGSF22Q8N9C0 903 aa21.16■□□□□ 0.98
TRADD-203ENST00000563348 HLA-CQ95604 372 aa21.16■□□□□ 0.98
TRADD-203ENST00000563348 CASD1Q96PB1 797 aa21.16■□□□□ 0.98
TRADD-203ENST00000563348 TYW1Q9NV66 732 aaKnown RBP21.16■□□□□ 0.98
TRADD-203ENST00000563348 STK24Q9Y6E0 443 aa21.16■□□□□ 0.98
TRADD-203ENST00000563348 COL4A4P53420 1690 aaPredicted RBP21.15■□□□□ 0.98
TRADD-203ENST00000563348 SKIP12755 728 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 ATF7P17544 494 aaPredicted RBP21.15■□□□□ 0.98
TRADD-203ENST00000563348 PRPHP41219 470 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 PHKA2P46019 1235 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 PTENP60484 403 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 TFDP1Q14186 410 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 TIGD5Q53EQ6 642 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 TWF2Q6IBS0 349 aaKnown RBP21.15■□□□□ 0.98
TRADD-203ENST00000563348 POTEGQ6S5H5 508 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 KLHL23Q8NBE8 558 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 RNF169Q8NCN4 708 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 SPPL3Q8TCT6 385 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 ASAP3Q8TDY4 903 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 SYMPKQ92797 1274 aaKnown RBP21.15■□□□□ 0.98
TRADD-203ENST00000563348 RAB34Q9BZG1 259 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 ALG13Q9NP73 1137 aaKnown RBP21.15■□□□□ 0.98
TRADD-203ENST00000563348 AAASQ9NRG9 546 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 AGPAT5Q9NUQ2 364 aa21.15■□□□□ 0.98
TRADD-203ENST00000563348 REV3LO60673 3130 aa21.14■□□□□ 0.98
TRADD-203ENST00000563348 RALGAPA2Q2PPJ7 1873 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 USO1O60763 962 aaKnown RBP21.14■□□□□ 0.97
TRADD-203ENST00000563348 ZNF623O75123 536 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 ITGB1P05556 798 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 GLRA2P23416 452 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 HOXA11P31270 313 aaPredicted RBP21.14■□□□□ 0.97
TRADD-203ENST00000563348 CCT6AP40227 531 aaKnown RBP21.14■□□□□ 0.97
TRADD-203ENST00000563348 TFF2Q03403 129 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 PCBP1Q15365 356 aaKnown RBP eCLIP21.14■□□□□ 0.97
TRADD-203ENST00000563348 IL17AQ16552 155 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 ECM1Q16610 540 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 AAK1Q2M2I8 961 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 SPOUT1Q5T280 376 aaKnown RBP21.14■□□□□ 0.97
TRADD-203ENST00000563348 DTHD1Q6ZMT9 781 aa21.14■□□□□ 0.97
TRADD-203ENST00000563348 IFNLR1Q8IU57 520 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms