RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CCL14Q16627 93 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 DUSP28Q4G0W2 176 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 SLC9A9Q8IVB4 645 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 CCDC112Q8NEF3 446 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 PPTC7Q8NI37 304 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 IFT74Q96LB3 600 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 PANX2Q96RD6 677 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 ADCY6O43306 1168 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 EPB41P11171 864 aaKnown RBP19.79■□□□□ 0.76
COMMD4-208ENST00000563220 CYP2B6P20813 491 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 GLRA2P23416 452 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 CYP2J2P51589 502 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 IQSEC1Q6DN90 963 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 BAG1Q99933 345 aaPredicted RBP19.79■□□□□ 0.76
COMMD4-208ENST00000563220 TTYH3Q9C0H2 523 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 RNPEPQ9H4A4 650 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 SPTLC3Q9NUV7 552 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 ARID2Q68CP9 1835 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 ZNF236Q9UL36 1845 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 LGALS2P05162 132 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 PSMC2P35998 433 aaKnown RBP19.78■□□□□ 0.76
COMMD4-208ENST00000563220 SLC26A2P50443 739 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 KCNMA1Q12791 1236 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 KCNH2Q12809 1159 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 DRP2Q13474 957 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 CNGA4Q8IV77 575 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 MAP4K3Q8IVH8 894 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 PCIF1Q9H4Z3 704 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 METTL14Q9HCE5 456 aaKnown RBP19.78■□□□□ 0.76
COMMD4-208ENST00000563220 ARHGAP28Q9P2N2 729 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 FAM184BQ9ULE4 1060 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 CAPN11Q9UMQ6 739 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 DOCK3Q8IZD9 2030 aa19.78■□□□□ 0.76
COMMD4-208ENST00000563220 NRDCO43847 1150 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 AOC2O75106 756 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 TPM1P09493 284 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 MYBPC2Q14324 1141 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 TAS1R3Q7RTX0 852 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 FAM186BQ8IYM0 893 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 TMEM174Q8WUU8 243 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 HVCN1Q96D96 273 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 PCMTD1Q96MG8 357 aaPredicted RBP19.77■□□□□ 0.76
COMMD4-208ENST00000563220 CBWD1Q9BRT8 395 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 MKNK1Q9BUB5 465 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 PPME1Q9Y570 386 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 ANKRD63C9JTQ0 380 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 TNPO2O14787 897 aaKnown RBP19.77■□□□□ 0.76
COMMD4-208ENST00000563220 STX10O60499 249 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 CYP2C19P33261 490 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 KRT9P35527 623 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 RGS2P41220 211 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 MKRN4PQ13434 485 aaPredicted RBP19.77■□□□□ 0.76
COMMD4-208ENST00000563220 C12orf56Q8IXR9 622 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 NUP58Q9BVL2 599 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 ABHD10Q9NUJ1 306 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 AGPAT5Q9NUQ2 364 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 ERAP1Q9NZ08 941 aa19.77■□□□□ 0.76
COMMD4-208ENST00000563220 CGNQ9P2M7 1197 aaKnown RBP19.77■□□□□ 0.76
COMMD4-208ENST00000563220 IGKV6-21A0A0C4DH24 114 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 EPHB6O15197 1021 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 HBP1O60381 514 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 ZNF865P0CJ78 1059 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-208ENST00000563220 TRIM21P19474 475 aaKnown RBP19.76■□□□□ 0.75
COMMD4-208ENST00000563220 ADSSP30520 456 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 E4F1Q66K89 784 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-208ENST00000563220 RETREG2Q8NC44 543 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 TRAPPC12Q8WVT3 735 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 SLC35C1Q96A29 364 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 CCDC51Q96ER9 411 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 MMRN2Q9H8L6 949 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 EXOC7Q9UPT5 735 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 TRPC6Q9Y210 931 aa19.76■□□□□ 0.75
COMMD4-208ENST00000563220 EXOC3O60645 756 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 PPFIA4O75335 1185 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 IGHA2P01877 340 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 XRCC5P13010 732 aaKnown RBP19.75■□□□□ 0.75
COMMD4-208ENST00000563220 CNGA1P29973 690 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 TNFAIP2Q03169 654 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 FIGNQ5HY92 759 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 RDH13Q8NBN7 331 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 ZSWIM2Q8NEG5 633 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 OR6J1Q8NGC5 347 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 SOCS4Q8WXH5 440 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 C16orf70Q9BSU1 422 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 ARHGAP39Q9C0H5 1083 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 SUGCTQ9HAC7 445 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 KCNG1Q9UIX4 513 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 FRMD4BQ9Y2L6 1034 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 LUC7L2Q9Y383 392 aaKnown RBP19.75■□□□□ 0.75
COMMD4-208ENST00000563220 USP27XA6NNY8 438 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 FECHP22830 423 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 NAMPTP43490 491 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 KCNJ6P48051 423 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 SNRPFP62306 86 aaKnown RBP19.75■□□□□ 0.75
COMMD4-208ENST00000563220 PPP2R3AQ06190 1150 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 NOGQ13253 232 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 DCAF17Q5H9S7 520 aaPredicted RBP19.75■□□□□ 0.75
COMMD4-208ENST00000563220 OLFML2BQ68BL8 750 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 SLC39A4Q6P5W5 647 aa19.75■□□□□ 0.75
COMMD4-208ENST00000563220 APBA2Q99767 749 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms