RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SZT2Q5T011 3432 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 PP2D1A8MPX8 630 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-204ENST00000563130 F13A1P00488 732 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 TMOD1P28289 359 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 CDC25AP30304 524 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 RFC5P40937 340 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 NASPP49321 788 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-204ENST00000563130 FXR1P51114 621 aaKnown RBP eCLIP6.9□□□□□ -1.32e-6■■■□□ 17.7
CNOT1-204ENST00000563130 TMEM62Q0P6H9 643 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 HYIQ5T013 277 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 METTL13Q8N6R0 699 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 USP38Q8NB14 1042 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 PIGOQ8TEQ8 1089 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 TMEM40Q8WWA1 233 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 AK8Q96MA6 479 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 NACC1Q96RE7 527 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 JPH2Q9BR39 696 aaPredicted RBP6.9□□□□□ -1.3
CNOT1-204ENST00000563130 ADAMTS10Q9H324 1103 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 AGO3Q9H9G7 860 aaKnown RBP6.9□□□□□ -1.3
CNOT1-204ENST00000563130 XPNPEP1Q9NQW7 623 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 PLA2G2EQ9NZK7 142 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 DBR1Q9UK59 544 aaKnown RBP6.9□□□□□ -1.3
CNOT1-204ENST00000563130 ZDHHC9Q9Y397 364 aa6.9□□□□□ -1.3
CNOT1-204ENST00000563130 ABHD14A-ACY1A0A1B0GW23 586 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 VWA3AA6NCI4 1184 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 DGAT1O75907 488 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 BRD1O95696 1058 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 VTNP04004 478 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 GHRP10912 638 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 ACTN1P12814 892 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 GPC3P51654 580 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 GRIN1Q05586 938 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 BECN1Q14457 450 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 SLC39A14Q15043 492 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 XKR9Q5GH70 373 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 FAM109BQ6ICB4 259 aaPredicted RBP6.9□□□□□ -1.31
CNOT1-204ENST00000563130 TSHZ1Q6ZSZ6 1077 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 FAM43BQ6ZT52 329 aaPredicted RBP6.9□□□□□ -1.31
CNOT1-204ENST00000563130 EXOC8Q8IYI6 725 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 KCTD17Q8N5Z5 321 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 SLC7A3Q8WY07 619 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 APBB2Q92870 758 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 MAP7D2Q96T17 732 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 IFIH1Q9BYX4 1025 aaKnown RBP6.9□□□□□ -1.31
CNOT1-204ENST00000563130 MTIF3Q9H2K0 278 aaKnown RBP6.9□□□□□ -1.31
CNOT1-204ENST00000563130 SUGCTQ9HAC7 445 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 IL21Q9HBE4 155 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 EVPLQ92817 2033 aa6.9□□□□□ -1.31
CNOT1-204ENST00000563130 A0A087WWV3 80 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 M0QZ92 97 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 GAS2O43903 313 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 EFCAB14O75071 495 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 DDIT3P35638 169 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 LONP1P36776 959 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 CCT6AP40227 531 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 CRYBB1P53674 252 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 POLGP54098 1239 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 NLRP11P59045 1033 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 WDR5P61964 334 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 SMAD3P84022 425 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 CDC42EP1Q00587 391 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 IKBKEQ14164 716 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 EMC2Q15006 297 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 KIZQ2M2Z5 673 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 KRT79Q5XKE5 535 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 LINC00301Q8NCQ3 95 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 PHOSPHO2Q8TCD6 241 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 SEPT8Q92599 483 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 MTRQ99707 1265 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 FBXO2Q9UK22 296 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 SRPRBQ9Y5M8 271 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 SLC26A4O43511 780 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 EIF4BP23588 611 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 DNM2P50570 870 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 KCNC4Q03721 635 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 TJAP1Q5JTD0 557 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 KCNK18Q7Z418 384 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF410Q86VK4 478 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 SLC9A7Q96T83 725 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 OSMRQ99650 979 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 DDX19AQ9NUU7 478 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 SUCLA2Q9P2R7 463 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 PADI3Q9ULW8 664 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 KIAA1024Q9UPX6 916 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 AKT3Q9Y243 479 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 NOC2LQ9Y3T9 749 aaKnown RBP6.89□□□□□ -1.31
CNOT1-204ENST00000563130 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 ARID2Q68CP9 1835 aa6.89□□□□□ -1.31
CNOT1-204ENST00000563130 GRXCR1A8MXD5 290 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 PPP6R2O75170 966 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 YEATS4O95619 227 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 DARSP14868 501 aaKnown RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 MARCKSP29966 332 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms