RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	TMEM173	Q86WV6	379 aa	Predicted RBP	9.47	□□□□□ -0.89
CKLF-208	ENST00000563092	C12orf76	Q8N812	135 aa	Predicted RBP	9.47	□□□□□ -0.89
CKLF-208	ENST00000563092	BBX	Q8WY36	941 aa	Predicted RBP	9.47	□□□□□ -0.89
CKLF-208	ENST00000563092	TRAIP	Q9BWF2	469 aa		9.47	□□□□□ -0.89
CKLF-208	ENST00000563092	RHOBTB2	Q9BYZ6	727 aa		9.47	□□□□□ -0.89
CKLF-208	ENST00000563092	MFSD1	Q9H3U5	465 aa		9.47	□□□□□ -0.89
CKLF-208	ENST00000563092	DLL3	Q9NYJ7	618 aa		9.47	□□□□□ -0.89
CKLF-208	ENST00000563092	OTOGL	Q3ZCN5	2332 aa		9.47	□□□□□ -0.89
CKLF-208	ENST00000563092	IGLV3-22	A0A075B6J6	115 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	CXCL14	O95715	111 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	IGHD	P01880	384 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	LMNA	P02545	664 aa	Known RBP	9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	VTN	P04004	478 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	GSPT1	P15170	499 aa	Known RBP	9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	EIF4B	P23588	611 aa	Known RBP	9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	LIFR	P42702	1097 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	CLK2	P49760	499 aa	Known RBP	9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	BCAR1	P56945	870 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	COL9A3	Q14050	684 aa	Predicted RBP	9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	GIT2	Q14161	759 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	FAM160B1	Q5W0V3	765 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	B4GALNT3	Q6L9W6	998 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	PDXDC2P	Q6P474	469 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	TMTC3	Q6ZXV5	915 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	DDX53	Q86TM3	631 aa	Known RBP	9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	CMTR1	Q8N1G2	835 aa	Known RBP	9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	TMTC2	Q8N394	836 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	FLCN	Q8NFG4	579 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	MAP4K1	Q92918	833 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	KCNK12	Q9HB15	430 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	RIC8A	Q9NPQ8	531 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	ZNF302	Q9NR11	478 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	DLGAP2	Q9P1A6	1054 aa		9.46	□□□□□ -0.9
CKLF-208	ENST00000563092	KRBA1	A5PL33	1030 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	CARNS1	A5YM72	827 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	FAM86B1	E9PN63	330 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	SH2B2	O14492	632 aa	Predicted RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	MAGEB2	O15479	319 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	LILRB3	O75022	631 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	FOS	P01100	380 aa	Predicted RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	FAM86B2	P0C5J1	330 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	CALM1	P0DP23	149 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	CALM2	P0DP24	149 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	CALM3	P0DP25	149 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	DARS	P14868	501 aa	Known RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	IBSP	P21815	317 aa	Predicted RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	CHML	P26374	656 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	FUT2	Q10981	343 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	WWC2	Q6AWC2	1192 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	SWSAP1	Q6NVH7	229 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	PPP1R18	Q6NYC8	613 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	C15orf39	Q6ZRI6	1047 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	OTOP3	Q7RTS5	596 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	ABI1	Q8IZP0	508 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	SIX5	Q8N196	739 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	VPS52	Q8N1B4	723 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	CMAS	Q8NFW8	434 aa	Predicted RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	BCL7C	Q8WUZ0	217 aa	Predicted RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	IGSF21	Q96ID5	467 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	TMEM87B	Q96K49	555 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	VN1R3	Q9BXE9	311 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	MRPL9	Q9BYD2	267 aa	Known RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	RWDD1	Q9H446	243 aa	Predicted RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	SFXN1	Q9H9B4	322 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	IGSF9	Q9P2J2	1179 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	WNT16	Q9UBV4	365 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	DBR1	Q9UK59	544 aa	Known RBP	9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	CEP250	Q9BV73	2442 aa		9.45	□□□□□ -0.9
CKLF-208	ENST00000563092	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	hCG_1642624	A0A1W2PR95	340 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	NT5C1B-RDH14	C9J2C7	533 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	BACH1	O14867	736 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	SGSM2	O43147	1006 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	N4BP1	O75113	896 aa	Known RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	CYP3A4	P08684	503 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	ZSCAN20	P17040	1043 aa	Predicted RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	ALDH7A1	P49419	539 aa	Known RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	GPC3	P51654	580 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	CLCN3	P51790	818 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	CLCN4	P51793	760 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	NLRP11	P59045	1033 aa	Known RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	AP3B2	Q13367	1082 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	PUM1	Q14671	1186 aa	Known RBP eCLIP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	BMS1	Q14692	1282 aa	Known RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	PTPN14	Q15678	1187 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	ZNF746	Q6NUN9	644 aa	Predicted RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	MIS18BP1	Q6P0N0	1132 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	TMC5	Q6UXY8	1006 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	CCDC149	Q6ZUS6	474 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	DGLUCY	Q7Z3D6	616 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	SGMS1	Q86VZ5	419 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	PPFIBP1	Q86W92	1011 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	SMAP1	Q8IYB5	467 aa	Predicted RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	FANCB	Q8NB91	859 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	HELQ	Q8TDG4	1101 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	AUTS2	Q8WXX7	1259 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	ACSF2	Q96CM8	615 aa	Predicted RBP	9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	TMEM169	Q96HH4	297 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	PPP1R16B	Q96T49	567 aa		9.44	□□□□□ -0.9
CKLF-208	ENST00000563092	ANO3	Q9BYT9	981 aa		9.44	□□□□□ -0.9

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