RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 DNM2P50570 870 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 BCAR1P56945 870 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 ATAT1Q5SQI0 421 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 KIAA1841Q6NSI8 718 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 PPFIBP1Q86W92 1011 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 TDRD5Q8NAT2 981 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 HELQQ8TDG4 1101 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 LENG9Q96B70 501 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 C22orf23Q9BZE7 217 aa17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 NAP1L2Q9ULW6 460 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-205ENST00000562914 C2CD4DB7Z1M9 353 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 GAS7O60861 476 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 CXCL14O95715 111 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 RAB27AP51159 221 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 FOXK2Q01167 660 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 ADCK5Q3MIX3 580 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 TEKT3Q9BXF9 490 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 RNF26Q9BY78 433 aaPredicted RBP17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 ZBP1Q9H171 429 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 USP34Q70CQ2 3546 aa17.75■□□□□ 0.43
HERPUD1-205ENST00000562914 BRD1O95696 1058 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 CTSAP10619 480 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 SP100P23497 879 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 CA8P35219 290 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 PHKA2P46019 1235 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 TARBP2Q15633 366 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 XKR3Q5GH77 459 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 LRCH2Q5VUJ6 765 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 GLB1LQ6UWU2 654 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 ZNF410Q86VK4 478 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 RASEFQ8IZ41 740 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 FBXL16Q8N461 479 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 SLC5A5Q92911 643 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 JPH2Q9BR39 696 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 NIFKQ9BYG3 293 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 FAM86C1Q9NVL1 165 aa17.74■□□□□ 0.43
HERPUD1-205ENST00000562914 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 H0Y858 1186 aa17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 MSH4O15457 936 aa17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 CLCN5P51795 746 aa17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 ACSF2Q96CM8 615 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 SH3GLB2Q9NR46 395 aa17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 DBR1Q9UK59 544 aaKnown RBP17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 CACNA1HO95180 2353 aa17.73■□□□□ 0.43
HERPUD1-205ENST00000562914 IGKV6-21A0A0C4DH24 114 aa17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 ZNF623O75123 536 aa17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 ZC3H11AO75152 810 aaKnown RBP eCLIP17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 PDGFBP01127 241 aaPredicted RBP17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 NBL1P41271 181 aa17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 RARS2Q5T160 578 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 ASTLQ6HA08 431 aaPredicted RBP17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 TWF2Q6IBS0 349 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 IGSF21Q96ID5 467 aa17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 MFSD1Q9H3U5 465 aa17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 CYP26B1Q9NR63 512 aa17.72■□□□□ 0.43
HERPUD1-205ENST00000562914 NT5C1B-RDH14C9J2C7 533 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 Q4G0T1 1027 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 NOMO2Q5JPE7 1267 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 Q6ZUG5 572 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 MIER3Q7Z3K6 550 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 CABP7Q86V35 215 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 EXOC8Q8IYI6 725 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 BRF1Q92994 677 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 PGBD4Q96DM1 585 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 UNC45AQ9H3U1 944 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 SFXN1Q9H9B4 322 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 FAM105AQ9NUU6 356 aa17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 SEPT9Q9UHD8 586 aaPredicted RBP17.71■□□□□ 0.43
HERPUD1-205ENST00000562914 ADAMTS3O15072 1205 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 CHMP2AO43633 222 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 PSMD10O75832 226 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 GALTP07902 379 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 IFNAR1P17181 557 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 FGFR4P22455 802 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 RNASELQ05823 741 aaKnown RBP17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 UGCGQ16739 394 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 BLOC1S2Q6QNY1 142 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 OTOP3Q7RTS5 596 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 FAM177A1Q8N128 213 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 TMEM105Q8N8V8 129 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 SLC22A17Q8WUG5 538 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 KCNB2Q92953 911 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 ZNF668Q96K58 619 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 EMILIN2Q9BXX0 1053 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 AGXT2Q9BYV1 514 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 TBC1D13Q9NVG8 400 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 LIMD1Q9UGP4 676 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 CDH22Q9UJ99 828 aa17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 PIN4Q9Y237 131 aaKnown RBP17.7■□□□□ 0.42
HERPUD1-205ENST00000562914 WDR81Q562E7 1941 aa17.69■□□□□ 0.42
HERPUD1-205ENST00000562914 CYP3A7-CYP3A51PA0A087WV96 503 aa17.69■□□□□ 0.42
HERPUD1-205ENST00000562914 A0A087WZ62 844 aa17.69■□□□□ 0.42
HERPUD1-205ENST00000562914 DKC1O60832 514 aaKnown RBP eCLIP17.69■□□□□ 0.42
HERPUD1-205ENST00000562914 CDC45O75419 566 aa17.69■□□□□ 0.42
HERPUD1-205ENST00000562914 MAFO75444 373 aaPredicted RBP17.69■□□□□ 0.42
HERPUD1-205ENST00000562914 EPCAMP16422 314 aa17.69■□□□□ 0.42
HERPUD1-205ENST00000562914 CYP3A7P24462 503 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms