RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 LINC01599Q8WXQ3 324 aa18.48■□□□□ 0.55
CDT1-202ENST00000562747 SLC7A3Q8WY07 619 aa18.48■□□□□ 0.55
CDT1-202ENST00000562747 FTHL17Q9BXU8 183 aa18.48■□□□□ 0.55
CDT1-202ENST00000562747 DHX33Q9H6R0 707 aaKnown RBP18.48■□□□□ 0.55
CDT1-202ENST00000562747 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
CDT1-202ENST00000562747 GINS2Q9Y248 185 aa18.48■□□□□ 0.55
CDT1-202ENST00000562747 STK24Q9Y6E0 443 aa18.48■□□□□ 0.55
CDT1-202ENST00000562747 LOXHD1Q8IVV2 1947 aa18.48■□□□□ 0.55
CDT1-202ENST00000562747 TTC3P53804 2025 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 C5orf42Q9H799 3197 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 C19orf67A6NJJ6 358 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 GAS2O43903 313 aaKnown RBP18.47■□□□□ 0.55
CDT1-202ENST00000562747 RPS6KA5O75582 802 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 SPATA31C1P0DKV0 1188 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 MUTP22033 750 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 RPA1P27694 616 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDT1-202ENST00000562747 BMPR1AP36894 532 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 GPC3P51654 580 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 POLGP54098 1239 aaPredicted RBP18.47■□□□□ 0.55
CDT1-202ENST00000562747 NLRP11P59045 1033 aaKnown RBP18.47■□□□□ 0.55
CDT1-202ENST00000562747 ATP2C1P98194 919 aaPredicted RBP18.47■□□□□ 0.55
CDT1-202ENST00000562747 HYAL1Q12794 435 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 CLUL1Q15846 466 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 CTC1Q2NKJ3 1217 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 DTHD1Q6ZMT9 781 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 CATSPER3Q86XQ3 398 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 IGSF22Q8N9C0 903 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 OSMRQ99650 979 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 ADAMTS10Q9H324 1103 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 CDHR5Q9HBB8 845 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 PADI3Q9ULW8 664 aa18.47■□□□□ 0.55
CDT1-202ENST00000562747 ARID2Q68CP9 1835 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 ZBTB39O15060 712 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 GPR182O15218 404 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 DCXO43602 365 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 MED24O75448 989 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 ALADP13716 330 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 DRP2Q13474 957 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 ARL6IP4Q66PJ3 421 aaKnown RBP18.46■□□□□ 0.55
CDT1-202ENST00000562747 ZNF579Q8NAF0 562 aaKnown RBP18.46■□□□□ 0.55
CDT1-202ENST00000562747 TMEM40Q8WWA1 233 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 CLP1Q92989 425 aaKnown RBP18.46■□□□□ 0.55
CDT1-202ENST00000562747 ZNF689Q96CS4 500 aaPredicted RBP18.46■□□□□ 0.55
CDT1-202ENST00000562747 PPP1R16BQ96T49 567 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 C11orf84Q9BUA3 381 aaPredicted RBP18.46■□□□□ 0.55
CDT1-202ENST00000562747 LRWD1Q9UFC0 647 aa18.46■□□□□ 0.55
CDT1-202ENST00000562747 NOC2LQ9Y3T9 749 aaKnown RBP18.46■□□□□ 0.55
CDT1-202ENST00000562747 ENPP3O14638 875 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 LINC01565O15544 149 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 STX6O43752 255 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 TBX10O75333 385 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 BMP15O95972 392 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
CDT1-202ENST00000562747 PDIA4P13667 645 aaKnown RBP18.45■□□□□ 0.54
CDT1-202ENST00000562747 RARRES1P49788 294 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 CAMK1Q14012 370 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 FERMT3Q86UX7 667 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 ZNF410Q86VK4 478 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 ADHFE1Q8IWW8 467 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 TCP11Q8WWU5 503 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 CCDC43Q96MW1 224 aaKnown RBP18.45■□□□□ 0.54
CDT1-202ENST00000562747 NACC1Q96RE7 527 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 ERVK-5Q9HDB9 667 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 SUCLA2Q9P2R7 463 aaPredicted RBP18.45■□□□□ 0.54
CDT1-202ENST00000562747 PRKAG3Q9UGI9 489 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 MTMR6Q9Y217 621 aa18.45■□□□□ 0.54
CDT1-202ENST00000562747 DGAT1O75907 488 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 RB1P06400 928 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 EIF4BP23588 611 aaKnown RBP18.44■□□□□ 0.54
CDT1-202ENST00000562747 IRS1P35568 1242 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 NFX1Q12986 1120 aaKnown RBP18.44■□□□□ 0.54
CDT1-202ENST00000562747 RESTQ13127 1097 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 EMC2Q15006 297 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 IL17AQ16552 155 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 ALYREFQ86V81 257 aaKnown RBP18.44■□□□□ 0.54
CDT1-202ENST00000562747 FAM228AQ86W67 206 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 PIGOQ8TEQ8 1089 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 NLRP7Q8WX94 980 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 SCLT1Q96NL6 688 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 MTRQ99707 1265 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 LMAN2LQ9H0V9 348 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 ALG13Q9NP73 1137 aaKnown RBP18.44■□□□□ 0.54
CDT1-202ENST00000562747 DBR1Q9UK59 544 aaKnown RBP18.44■□□□□ 0.54
CDT1-202ENST00000562747 ST3GAL5Q9UNP4 418 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 PIEZO1Q92508 2521 aa18.44■□□□□ 0.54
CDT1-202ENST00000562747 PLXNA4Q9HCM2 1894 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 MBTPS2O43462 519 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 DGKIO75912 1065 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 DARSP14868 501 aaKnown RBP18.43■□□□□ 0.54
CDT1-202ENST00000562747 DNAJB1P25685 340 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 CCT6AP40227 531 aaKnown RBP18.43■□□□□ 0.54
CDT1-202ENST00000562747 BTG3Q14201 252 aaPredicted RBP18.43■□□□□ 0.54
CDT1-202ENST00000562747 SMAD2Q15796 467 aaKnown RBP18.43■□□□□ 0.54
CDT1-202ENST00000562747 POTEGQ6S5H5 508 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 RTN4RL1Q86UN2 441 aaPredicted RBP18.43■□□□□ 0.54
CDT1-202ENST00000562747 RHPN2Q8IUC4 686 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 CRIPAKQ8N1N5 446 aa18.43■□□□□ 0.54
CDT1-202ENST00000562747 PSPC1Q8WXF1 523 aaKnown RBP18.43■□□□□ 0.54
CDT1-202ENST00000562747 GCOM2Q9BZD3 368 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms