RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 MARSP56192 900 aaKnown RBP15.33■□□□□ 0.04
CLK3-209ENST00000562670 FANCCQ00597 558 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 POU5F1BQ06416 359 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 TRIM32Q13049 653 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 PPFIA1Q13136 1202 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 CDCA2Q69YH5 1023 aaPredicted RBP15.33■□□□□ 0.04
CLK3-209ENST00000562670 MAEAQ7L5Y9 396 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 HS2ST1Q7LGA3 356 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 TRMT1LQ7Z2T5 733 aaKnown RBP15.33■□□□□ 0.04
CLK3-209ENST00000562670 SLC9A9Q8IVB4 645 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 ANKRD20A12PQ8NF67 263 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 ACCSQ96QU6 501 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 NFKBIZQ9BYH8 718 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 GBP3Q9H0R5 595 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 KMT5AQ9NQR1 393 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 LIMA1Q9UHB6 759 aaKnown RBP15.33■□□□□ 0.04
CLK3-209ENST00000562670 DDX20Q9UHI6 824 aaKnown RBP15.33■□□□□ 0.04
CLK3-209ENST00000562670 EXOC7Q9UPT5 735 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 SCN10AQ9Y5Y9 1956 aa15.33■□□□□ 0.04
CLK3-209ENST00000562670 MBLAC1A4D2B0 266 aaPredicted RBP15.32■□□□□ 0.04
CLK3-209ENST00000562670 TGFB1I1O43294 461 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 PRPF6O94906 941 aaKnown RBP15.32■□□□□ 0.04
CLK3-209ENST00000562670 ADCY5O95622 1261 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 INHAP05111 366 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 GRK4P32298 578 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 DEKP35659 375 aaKnown RBP15.32■□□□□ 0.04
CLK3-209ENST00000562670 PSEN2P49810 448 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 DNM2P50570 870 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 ZNF75DP51815 510 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 MFSD10Q14728 455 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 GRIK4Q16099 956 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 TCP11X2Q5H9J9 407 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 APTXQ7Z2E3 356 aaKnown RBP15.32■□□□□ 0.04
CLK3-209ENST00000562670 IRF2BP1Q8IU81 584 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 DNAJC5GQ8N7S2 189 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 KLHDC9Q8NEP7 349 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 ASAP3Q8TDY4 903 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 TMEM143Q96AN5 459 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 MTG1Q9BT17 334 aaPredicted RBP15.32■□□□□ 0.04
CLK3-209ENST00000562670 TRIM5Q9C035 493 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 XPNPEP3Q9NQH7 507 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 ADGRA3Q8IWK6 1321 aa15.32■□□□□ 0.04
CLK3-209ENST00000562670 FRMPD3Q5JV73 1810 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 A0A1B0GTH6 734 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 KCNJ18B7U540 433 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 SLC16A4O15374 487 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 SLC16A3O15427 465 aaKnown RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 PIGRP01833 764 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 TPM3P06753 285 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 C6orf222P0C671 652 aaPredicted RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 TMOD1P28289 359 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 CCND3P30281 292 aaPredicted RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 EFNA5P52803 228 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 SOX10P56693 466 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 ADAM17P78536 824 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 CAPSQ13938 189 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 KCNJ12Q14500 433 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 KIAA0753Q2KHM9 967 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 ZC2HC1CQ53FD0 456 aaPredicted RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 CCSAPQ6IQ19 270 aaPredicted RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 FILIP1Q7Z7B0 1213 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 IFNLR1Q8IU57 520 aaPredicted RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 ZNF710Q8N1W2 664 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 MKNK1Q9BUB5 465 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 SRRTQ9BXP5 876 aaKnown RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 C2orf40Q9H1Z8 148 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 TMEM134Q9H6X4 195 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 POLD4Q9HCU8 107 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 AGPAT3Q9NRZ7 376 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 MAGEC2Q9UBF1 373 aaPredicted RBP15.31■□□□□ 0.04
CLK3-209ENST00000562670 TBX20Q9UMR3 447 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 TRIM17Q9Y577 477 aa15.31■□□□□ 0.04
CLK3-209ENST00000562670 HTTP42858 3142 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 DENND3A2RUS2 1198 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 CETN3O15182 167 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 SERPINC1P01008 464 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 MYL3P08590 195 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 SMIM10L2AP0DMW4 78 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 SMIM10L2BP0DMW5 78 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 PRKCSHP14314 528 aaPredicted RBP15.3■□□□□ 0.04
CLK3-209ENST00000562670 CDK11BP21127 795 aaKnown RBP15.3■□□□□ 0.04
CLK3-209ENST00000562670 NR2F2P24468 414 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 KLRC1P26715 233 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 CNGA1P29973 690 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 CDC42EP1Q00587 391 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 KCNA1Q09470 495 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 LAMTOR4Q0VGL1 99 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 TFDP1Q14186 410 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 GNASQ5JWF2 1037 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 MARCH8Q5T0T0 291 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 EFCAB12Q6NXP0 572 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 MTHFD1LQ6UB35 978 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 SESTD1Q86VW0 696 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 PCSK9Q8NBP7 692 aaKnown RBP15.3■□□□□ 0.04
CLK3-209ENST00000562670 DEPTORQ8TB45 409 aa15.3■□□□□ 0.04
CLK3-209ENST00000562670 LMBR1Q8WVP7 490 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms