RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 WDR11Q9BZH6 1224 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 ISCUQ9H1K1 167 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 TAF1DQ9H5J8 278 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 DDX4Q9NQI0 724 aaKnown RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 ADAMTS1Q9UHI8 967 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 FEZ2Q9UHY8 353 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 DMGDHQ9UI17 866 aaKnown RBP8.16□□□□□ -1.1
CFDP1-202ENST00000562602 TMEM59LQ9UK28 342 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 PNMA2Q9UL42 364 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 ODF2LQ9ULJ1 636 aa8.16□□□□□ -1.1
CFDP1-202ENST00000562602 FOCADQ5VW36 1801 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 SBF2Q86WG5 1849 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 QSER1Q2KHR3 1735 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 GOLGA6L10A0A0M3HER8 536 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 MEIS2O14770 477 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 P4HA2O15460 535 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 BUB1O43683 1085 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 PLA2G6O60733 806 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 MED24O75448 989 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 FAM13AO94988 1023 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 HEXIM1O94992 359 aaKnown RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 KIF4AO95239 1232 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 NR3C1P04150 777 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 MAPTP10636 758 aaKnown RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 BMP3P12645 472 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 EEF2P13639 858 aaKnown RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 KLRC1P26715 233 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 PON1P27169 355 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 HSPA9P38646 679 aaKnown RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 USP8P40818 1118 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 MATR3P43243 847 aaKnown RBP eCLIP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 NOP2P46087 812 aaKnown RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 IRAK1P51617 712 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 EIF6P56537 245 aaKnown RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 SETQ01105 290 aaPredicted RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 GUCY2DQ02846 1103 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 SPIRE1Q08AE8 756 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 EPHA7Q15375 998 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 ABCB5Q2M3G0 1257 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 PRR16Q569H4 304 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 ARSHQ5FYA8 562 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 CC2D2BQ6DHV5 1058 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 KDM7AQ6ZMT4 941 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 KCTD1Q719H9 257 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 ARMC9Q7Z3E5 817 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 SLFN11Q7Z7L1 901 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 NELFCDQ8IXH7 590 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 IQCKQ8N0W5 287 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 RASGEF1CQ8N431 466 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 SAMD3Q8N6K7 520 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 FAM133AQ8N9E0 248 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 SCFD2Q8WU76 684 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 CHURC1Q8WUH1 139 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 GPR101Q96P66 508 aaPredicted RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 INPP4AQ96PE3 977 aaPredicted RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 NACC1Q96RE7 527 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 TIPINQ9BVW5 301 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 STK33Q9BYT3 514 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 FAM129AQ9BZQ8 928 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 ZHX3Q9H4I2 956 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 EPB41L5Q9HCM4 733 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 KCNQ5Q9NR82 932 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 FAM114A2Q9NRY5 505 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 RBM12Q9NTZ6 932 aaKnown RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 RSPH14Q9UHP6 348 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 HERC5Q9UII4 1024 aaKnown RBP8.15□□□□□ -1.1
CFDP1-202ENST00000562602 NAGPAQ9UK23 515 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 TFR2Q9UP52 801 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 FRMD4BQ9Y2L6 1034 aa8.15□□□□□ -1.1
CFDP1-202ENST00000562602 LRRC37AA6NMS7 1700 aa8.15□□□□□ -1.11
CFDP1-202ENST00000562602 PFASO15067 1338 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 A0A087X0T9 212 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L15C9J2P7 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L13C9JLJ4 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L11C9JVI0 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L18D6R9N7 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L22D6RA61 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L17D6RBQ6 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L19D6RCP7 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L20D6RJB6 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 F5H6K3 240 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 MAPK13O15264 365 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 TMEM253P0C7T8 217 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 FAM228BP0C875 321 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 SPATA31C1P0DKV0 1188 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 MYBP10242 640 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 MYBL2P10244 700 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 BCRP11274 1271 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 SLC16A2P36021 539 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 EIF3BP55884 814 aaKnown RBP8.14□□□□□ -1.11
CFDP1-202ENST00000562602 JAM2P57087 298 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 PTK2Q05397 1052 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 KLRC3Q07444 240 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 USP17L24Q0WX57 530 aa8.14□□□□□ -1.11
CFDP1-202ENST00000562602 IKQ13123 557 aaPredicted RBP8.14□□□□□ -1.11
CFDP1-202ENST00000562602 PPP2R5CQ13362 524 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms