RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 ZNF804BA4D1E1 1349 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 KIDINS220Q9ULH0 1771 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 H0Y626 953 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 J3QW42 95 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 NDC80O14777 642 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 FYB1O15117 783 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 PLSCR1O15162 318 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 SLC7A4O43246 635 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 STX6O43752 255 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 MAP3K6O95382 1288 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 EEF2P13639 858 aaKnown RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 PSMA4P25789 261 aaKnown RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 TCF7P36402 384 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 MAPK8P45983 427 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 PHKA1P46020 1223 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 MNAT1P51948 309 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 SLC12A2P55011 1212 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 CASP7P55210 303 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 FKBP4Q02790 459 aaKnown RBP eCLIP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 TCIRG1Q13488 830 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 SAFBQ15424 915 aaKnown RBP eCLIP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 TCEA2Q15560 299 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 CCNG2Q16589 344 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 C15orf59Q2T9L4 293 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 TUBB8Q3ZCM7 444 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 ATP13A4Q4VNC1 1196 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 TM4SF20Q53R12 229 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 MEX3CQ5U5Q3 659 aaKnown RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 KIAA0319Q5VV43 1072 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 RETSATQ6NUM9 610 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 BNC2Q6ZN30 1099 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 C4orf50Q6ZRC1 276 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 CCDC84Q86UT8 332 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 GAS2L3Q86XJ1 694 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 WFDC8Q8IUA0 241 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 PASD1Q8IV76 773 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 ITPRIPQ8IWB1 547 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 CCDC13Q8IYE1 715 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 TMEM57Q8N5G2 664 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 FBF1Q8TES7 1133 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 PARD3BQ8TEW8 1205 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 DNAAF4Q8WXU2 420 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 FATE1Q969F0 183 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 ADPGKQ9BRR6 497 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 CAAP1Q9H8G2 361 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 TOPORSQ9NS56 1045 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 ZBTB40Q9NUA8 1239 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 SEPT11Q9NVA2 429 aaKnown RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 SIRT5Q9NXA8 310 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 OGFRQ9NZT2 677 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 AGO2Q9UKV8 859 aaKnown RBP6.04□□□□□ -1.44
CAPN3-211ENST00000562199 FAM50BQ9Y247 325 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 PLAAQ9Y263 795 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 SLC4A7Q9Y6M7 1214 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 ASXL2Q76L83 1435 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 NEXMIFQ5QGS0 1516 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 LRRC7Q96NW7 1537 aa6.04□□□□□ -1.44
CAPN3-211ENST00000562199 C17orf113A0A1B0GUU1 675 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 LRRC10BA6NIK2 292 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 KCNJ13O60928 360 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 XYLBO75191 536 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 DDHD2O94830 711 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 EPN2O95208 641 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 CTSHP09668 335 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 EIF2AK2P19525 551 aaKnown RBP6.03□□□□□ -1.44
CAPN3-211ENST00000562199 CHMLP26374 656 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 POLR2BP30876 1174 aaKnown RBP6.03□□□□□ -1.44
CAPN3-211ENST00000562199 NF2P35240 595 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 IREB2P48200 963 aaKnown RBP6.03□□□□□ -1.44
CAPN3-211ENST00000562199 MTHFSP49914 203 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ETV1P50549 477 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 GJA9P57773 515 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ZNF445P59923 1031 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ARPC4P59998 168 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 CD83Q01151 205 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 GBE1Q04446 702 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 PPP2R3AQ06190 1150 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 EXOSC9Q06265 439 aaKnown RBP6.03□□□□□ -1.44
CAPN3-211ENST00000562199 DMPKQ09013 629 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 FKBP5Q13451 457 aaPredicted RBP6.03□□□□□ -1.44
CAPN3-211ENST00000562199 MTMR3Q13615 1198 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 DSC3Q14574 896 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 SSPNQ14714 243 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ASIC2Q16515 512 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 KLHL40Q2TBA0 621 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 C5orf22Q49AR2 442 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 HS1BP3Q53T59 392 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 SLC45A4Q5BKX6 768 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ITPRIPL1Q6GPH6 555 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ARHGAP27Q6ZUM4 889 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ILDR2Q71H61 639 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ATG9AQ7Z3C6 839 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 PPP1R42Q7Z4L9 355 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 LRRTM3Q86VH5 581 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 PPFIBP1Q86W92 1011 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 CHD1LQ86WJ1 897 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 FBXO11Q86XK2 927 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 TREML1Q86YW5 311 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 ZNF619Q8N2I2 560 aa6.03□□□□□ -1.44
CAPN3-211ENST00000562199 CBARPQ8N350 705 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms