RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 KCNN1Q92952 543 aa11.96□□□□□ -0.49
AC009054.2-201ENST00000561956 DUSP9Q99956 384 aaKnown RBP11.96□□□□□ -0.49
AC009054.2-201ENST00000561956 NTPCRQ9BSD7 190 aaKnown RBP11.96□□□□□ -0.49
AC009054.2-201ENST00000561956 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.96□□□□□ -0.49
AC009054.2-201ENST00000561956 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.49
AC009054.2-201ENST00000561956 KCNG1Q9UIX4 513 aa11.96□□□□□ -0.49
AC009054.2-201ENST00000561956 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
AC009054.2-201ENST00000561956 CENPFP49454 3210 aa11.96□□□□□ -0.5
AC009054.2-201ENST00000561956 ZMYM2Q9UBW7 1377 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 ADGRA3Q8IWK6 1321 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 NRCAMQ92823 1304 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 CCDC169A6NNP5 214 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 H0YCG3 227 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 SLC16A4O15374 487 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 ZNF18P17022 549 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 KLRC1P26715 233 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 HOXC8P31273 242 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 NAMPTP43490 491 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 CLCN3P51790 818 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 SMTNP53814 917 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 TPM4P67936 248 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 GTF2BQ00403 316 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 LRRC63Q05C16 580 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 PPP2R5AQ15172 486 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 KNOP1Q1ED39 458 aaKnown RBP11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 ZC2HC1CQ53FD0 456 aaPredicted RBP11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 MARCH8Q5T0T0 291 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 CDKAL1Q5VV42 579 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 ANKRD40Q6AI12 368 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 EFCAB12Q6NXP0 572 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 MTHFD1LQ6UB35 978 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 HAUS6Q7Z4H7 955 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 CTU1Q7Z7A3 348 aaKnown RBP11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 LRRC71Q8N4P6 559 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 RETREG2Q8NC44 543 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 LMBR1Q8WVP7 490 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 PSPC1Q8WXF1 523 aaKnown RBP11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 HVCN1Q96D96 273 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 ZBTB10Q96DT7 871 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 SUGCTQ9HAC7 445 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 KMT5AQ9NQR1 393 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 SETD4Q9NVD3 440 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 FANCLQ9NW38 375 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 ARHGAP28Q9P2N2 729 aa11.95□□□□□ -0.5
AC009054.2-201ENST00000561956 MBLAC1A4D2B0 266 aaPredicted RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 ASGR1P07306 291 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 SCP2P22307 547 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 DNM2P50570 870 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 ADAM17P78536 824 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 KCNA1Q09470 495 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 CAPSQ13938 189 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 MXD4Q14582 209 aaPredicted RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 KCNA10Q16322 511 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 EDRF1Q3B7T1 1238 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 SLC9C1Q4G0N8 1177 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 RNF180Q86T96 592 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 ZC3H3Q8IXZ2 948 aaKnown RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 PCSK9Q8NBP7 692 aaKnown RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 NOC3LQ8WTT2 800 aaKnown RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 PRPF31Q8WWY3 499 aaKnown RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 ACCSQ96QU6 501 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 TSG101Q99816 390 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 KIFC3Q9BVG8 833 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 UNC93B1Q9H1C4 597 aa11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 TYW1Q9NV66 732 aaKnown RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 SUCLA2Q9P2R7 463 aaPredicted RBP11.94□□□□□ -0.5
AC009054.2-201ENST00000561956 TRIP12Q14669 1992 aaPredicted RBP11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 DENND3A2RUS2 1198 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 LRRIQ4A6NIV6 560 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 PDXKO00764 312 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 ASAP2O43150 1006 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 TGFB1I1O43294 461 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 AP5Z1O43299 807 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 HSPA1AP0DMV8 641 aaKnown RBP11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 HSPA1BP0DMV9 641 aaKnown RBP11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 TMOD1P28289 359 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 ABCD1P33897 745 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 CTCFP49711 727 aaPredicted RBP11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 LAMTOR4Q0VGL1 99 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 HIC1Q14526 733 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 TPD52L1Q16890 204 aaPredicted RBP11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 NBPF20Q3BBV1 942 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 NFRKBQ6P4R8 1299 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 SARM1Q6SZW1 724 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 LRRC55Q6ZSA7 311 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 TAS1R3Q7RTX0 852 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 MAP4K3Q8IVH8 894 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 KSR1Q8IVT5 923 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 CSGALNACT2Q8N6G5 542 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 METTL13Q8N6R0 699 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 DEPTORQ8TB45 409 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 PPP1R13LQ8WUF5 828 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 TSEN34Q9BSV6 310 aaKnown RBP11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 THAP9Q9H5L6 903 aa11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 PAK6Q9NQU5 681 aaPredicted RBP11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 SAMSN1Q9NSI8 373 aaKnown RBP11.93□□□□□ -0.5
AC009054.2-201ENST00000561956 HDAC6Q9UBN7 1215 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms