RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 TPH2Q8IWU9 490 aa28.42■■■□□ 2.14
MSLN-203ENST00000561896 ZNF579Q8NAF0 562 aaKnown RBP28.42■■■□□ 2.14
MSLN-203ENST00000561896 FAM184AQ8NB25 1140 aa28.42■■■□□ 2.14
MSLN-203ENST00000561896 KLHL23Q8NBE8 558 aa28.42■■■□□ 2.14
MSLN-203ENST00000561896 SPPL3Q8TCT6 385 aa28.42■■■□□ 2.14
MSLN-203ENST00000561896 TCP11Q8WWU5 503 aa28.42■■■□□ 2.14
MSLN-203ENST00000561896 PSPC1Q8WXF1 523 aaKnown RBP28.42■■■□□ 2.14
MSLN-203ENST00000561896 PABPC5Q96DU9 382 aaKnown RBP28.42■■■□□ 2.14
MSLN-203ENST00000561896 ALG13Q9NP73 1137 aaKnown RBP28.42■■■□□ 2.14
MSLN-203ENST00000561896 COL4A3BPQ9Y5P4 624 aa28.42■■■□□ 2.14
MSLN-203ENST00000561896 ASAP2O43150 1006 aa28.41■■■□□ 2.14
MSLN-203ENST00000561896 ST18O60284 1047 aa28.41■■■□□ 2.14
MSLN-203ENST00000561896 FGFR1P11362 822 aa28.41■■■□□ 2.14
MSLN-203ENST00000561896 IBSPP21815 317 aaPredicted RBP28.41■■■□□ 2.14
MSLN-203ENST00000561896 TXKP42681 527 aa28.41■■■□□ 2.14
MSLN-203ENST00000561896 UBE3AQ05086 875 aa28.41■■■□□ 2.14
MSLN-203ENST00000561896 CAMK1Q14012 370 aa28.41■■■□□ 2.14
MSLN-203ENST00000561896 UPF2Q9HAU5 1272 aaKnown RBP28.41■■■□□ 2.14
MSLN-203ENST00000561896 IFT122Q9HBG6 1241 aa28.41■■■□□ 2.14
MSLN-203ENST00000561896 ANKEF1Q9NU02 776 aa28.41■■■□□ 2.14
MSLN-203ENST00000561896 XRCC6P12956 609 aaKnown RBP eCLIP28.4■■■□□ 2.14
MSLN-203ENST00000561896 TRAPPC10P48553 1259 aa28.4■■■□□ 2.14
MSLN-203ENST00000561896 XKR9Q5GH70 373 aa28.4■■■□□ 2.14
MSLN-203ENST00000561896 ZNF598Q86UK7 904 aaKnown RBP28.4■■■□□ 2.14
MSLN-203ENST00000561896 NLRP4Q96MN2 994 aa28.4■■■□□ 2.14
MSLN-203ENST00000561896 RNF19AQ9NV58 838 aa28.4■■■□□ 2.14
MSLN-203ENST00000561896 TYW1Q9NV66 732 aaKnown RBP28.4■■■□□ 2.14
MSLN-203ENST00000561896 CSDE1O75534 798 aaKnown RBP28.39■■■□□ 2.14
MSLN-203ENST00000561896 SKIP12755 728 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 FGFR4P22455 802 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 EMC2Q15006 297 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 PUS10Q3MIT2 529 aaKnown RBP28.39■■■□□ 2.14
MSLN-203ENST00000561896 SRGAP1Q7Z6B7 1085 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 NOSTRINQ8IVI9 506 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 KSR1Q8IVT5 923 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 PRPF31Q8WWY3 499 aaKnown RBP28.39■■■□□ 2.14
MSLN-203ENST00000561896 PPP2R3CQ969Q6 453 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 CASD1Q96PB1 797 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 TMEM60Q9H2L4 133 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 PLXNA4Q9HCM2 1894 aa28.39■■■□□ 2.14
MSLN-203ENST00000561896 LAG3P18627 525 aa28.38■■■□□ 2.13
MSLN-203ENST00000561896 KCNA5P22460 613 aa28.38■■■□□ 2.13
MSLN-203ENST00000561896 MCM7P33993 719 aa28.38■■■□□ 2.13
MSLN-203ENST00000561896 SPOUT1Q5T280 376 aaKnown RBP28.38■■■□□ 2.13
MSLN-203ENST00000561896 ABI1Q8IZP0 508 aa28.38■■■□□ 2.13
MSLN-203ENST00000561896 LRRC43Q8N309 656 aa28.38■■■□□ 2.13
MSLN-203ENST00000561896 TMEM143Q96AN5 459 aa28.38■■■□□ 2.13
MSLN-203ENST00000561896 MTRQ99707 1265 aa28.38■■■□□ 2.13
MSLN-203ENST00000561896 CWH43Q9H720 699 aa28.38■■■□□ 2.13
MSLN-203ENST00000561896 ZBTB39O15060 712 aa28.37■■■□□ 2.13
MSLN-203ENST00000561896 DGAT1O75907 488 aa28.37■■■□□ 2.13
MSLN-203ENST00000561896 LAMTOR4Q0VGL1 99 aa28.37■■■□□ 2.13
MSLN-203ENST00000561896 MXD4Q14582 209 aaPredicted RBP28.37■■■□□ 2.13
MSLN-203ENST00000561896 PCBP1Q15365 356 aaKnown RBP eCLIP28.37■■■□□ 2.13
MSLN-203ENST00000561896 CTC1Q2NKJ3 1217 aa28.37■■■□□ 2.13
MSLN-203ENST00000561896 CATSPER4Q7RTX7 472 aa28.37■■■□□ 2.13
MSLN-203ENST00000561896 FERMT3Q86UX7 667 aa28.37■■■□□ 2.13
MSLN-203ENST00000561896 POF1BQ8WVV4 589 aa28.37■■■□□ 2.13
MSLN-203ENST00000561896 ZNF623O75123 536 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 ATF7P17544 494 aaPredicted RBP28.36■■■□□ 2.13
MSLN-203ENST00000561896 ATP2B1P20020 1258 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 DNAJB1P25685 340 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 U2AF2P26368 475 aaKnown RBP eCLIP28.36■■■□□ 2.13
MSLN-203ENST00000561896 PHKA2P46019 1235 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 RAB27AP51159 221 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 POU5F1BQ06416 359 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 GNL2Q13823 731 aaKnown RBP28.36■■■□□ 2.13
MSLN-203ENST00000561896 COLGALT1Q8NBJ5 622 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 TUFT1Q9NNX1 390 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 AGPAT5Q9NUQ2 364 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 PIN4Q9Y237 131 aaKnown RBP28.36■■■□□ 2.13
MSLN-203ENST00000561896 KIF3AQ9Y496 699 aa28.36■■■□□ 2.13
MSLN-203ENST00000561896 POTEMA6NI47 508 aa28.35■■■□□ 2.13
MSLN-203ENST00000561896 OR52Z1P0C646 297 aa28.35■■■□□ 2.13
MSLN-203ENST00000561896 HYAL1Q12794 435 aa28.35■■■□□ 2.13
MSLN-203ENST00000561896 CLLU1OSQ5K130 101 aa28.35■■■□□ 2.13
MSLN-203ENST00000561896 TWF2Q6IBS0 349 aaKnown RBP28.35■■■□□ 2.13
MSLN-203ENST00000561896 LRRC55Q6ZSA7 311 aa28.35■■■□□ 2.13
MSLN-203ENST00000561896 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.35■■■□□ 2.13
MSLN-203ENST00000561896 MRPL9Q9BYD2 267 aaKnown RBP28.35■■■□□ 2.13
MSLN-203ENST00000561896 XPNPEP1Q9NQW7 623 aa28.35■■■□□ 2.13
MSLN-203ENST00000561896 NOL7Q9UMY1 257 aaKnown RBP28.35■■■□□ 2.13
MSLN-203ENST00000561896 LZTS1Q9Y250 596 aa28.35■■■□□ 2.13
MSLN-203ENST00000561896 FGF18O76093 207 aa28.34■■■□□ 2.13
MSLN-203ENST00000561896 SRGAP2CP0DJJ0 459 aa28.34■■■□□ 2.13
MSLN-203ENST00000561896 RARRES1P49788 294 aa28.34■■■□□ 2.13
MSLN-203ENST00000561896 PLCB3Q01970 1234 aa28.34■■■□□ 2.13
MSLN-203ENST00000561896 TTC38Q5R3I4 469 aa28.34■■■□□ 2.13
MSLN-203ENST00000561896 PDE12Q6L8Q7 609 aaKnown RBP28.34■■■□□ 2.13
MSLN-203ENST00000561896 POLR3CQ9BUI4 534 aaPredicted RBP28.34■■■□□ 2.13
MSLN-203ENST00000561896 CARNS1A5YM72 827 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 SPATA31C1P0DKV0 1188 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 PPM1AP35813 382 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 MCM2P49736 904 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 IFNLR1Q8IU57 520 aaPredicted RBP28.33■■■□□ 2.13
MSLN-203ENST00000561896 THNSL1Q8IYQ7 743 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 RNF149Q8NC42 400 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 RNF169Q8NCN4 708 aa28.33■■■□□ 2.13
MSLN-203ENST00000561896 CCDC43Q96MW1 224 aaKnown RBP28.33■■■□□ 2.13
MSLN-203ENST00000561896 NECAB3Q96P71 396 aaPredicted RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms