RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 LMAN2LQ9H0V9 348 aa23.05■■□□□ 1.28
TPM1-232ENST00000561425 ATP6V0A4Q9HBG4 840 aa23.05■■□□□ 1.28
TPM1-232ENST00000561425 COG5Q9UP83 839 aa23.05■■□□□ 1.28
TPM1-232ENST00000561425 PCDHB6Q9Y5E3 794 aa23.05■■□□□ 1.28
TPM1-232ENST00000561425 A0A0C4DFX4 3053 aa23.05■■□□□ 1.28
TPM1-232ENST00000561425 RALGAPA2Q2PPJ7 1873 aa23.05■■□□□ 1.28
TPM1-232ENST00000561425 MED24O75448 989 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 DGAT1O75907 488 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 EOMESO95936 686 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 MUTP22033 750 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 SFPQP23246 707 aaKnown RBP eCLIP23.04■■□□□ 1.28
TPM1-232ENST00000561425 ARL2P36404 184 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 MRPS5P82675 430 aaKnown RBP23.04■■□□□ 1.28
TPM1-232ENST00000561425 CUL4AQ13619 759 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 GNL2Q13823 731 aaKnown RBP23.04■■□□□ 1.28
TPM1-232ENST00000561425 PDIA5Q14554 519 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 NBR1Q14596 966 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 TJAP1Q5JTD0 557 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 SCLT1Q96NL6 688 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 MTRQ99707 1265 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.04■■□□□ 1.28
TPM1-232ENST00000561425 DACT1Q9NYF0 836 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 DBR1Q9UK59 544 aaKnown RBP23.04■■□□□ 1.28
TPM1-232ENST00000561425 PLAGL2Q9UPG8 496 aa23.04■■□□□ 1.28
TPM1-232ENST00000561425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.03■■□□□ 1.28
TPM1-232ENST00000561425 GRM6O15303 877 aa23.03■■□□□ 1.28
TPM1-232ENST00000561425 ATF7P17544 494 aaPredicted RBP23.03■■□□□ 1.28
TPM1-232ENST00000561425 CAMK1Q14012 370 aa23.03■■□□□ 1.28
TPM1-232ENST00000561425 COL19A1Q14993 1142 aa23.03■■□□□ 1.28
TPM1-232ENST00000561425 IFNLR1Q8IU57 520 aaPredicted RBP23.03■■□□□ 1.28
TPM1-232ENST00000561425 PIGOQ8TEQ8 1089 aa23.03■■□□□ 1.28
TPM1-232ENST00000561425 NLRP4Q96MN2 994 aa23.03■■□□□ 1.28
TPM1-232ENST00000561425 CASD1Q96PB1 797 aa23.03■■□□□ 1.28
TPM1-232ENST00000561425 TMEM117Q9H0C3 514 aa23.03■■□□□ 1.28
TPM1-232ENST00000561425 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.03■■□□□ 1.28
TPM1-232ENST00000561425 LAD1O00515 517 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 HOXA2O43364 376 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 ZNF623O75123 536 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 FGFR1P11362 822 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 PTGDRQ13258 359 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 MXD4Q14582 209 aaPredicted RBP23.02■■□□□ 1.28
TPM1-232ENST00000561425 PAN2Q504Q3 1202 aaKnown RBP23.02■■□□□ 1.28
TPM1-232ENST00000561425 IGSF22Q8N9C0 903 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 NACC1Q96RE7 527 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 CWH43Q9H720 699 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 MINDY3Q9H8M7 445 aa23.02■■□□□ 1.28
TPM1-232ENST00000561425 A0A087WWV3 80 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 TBKBP1A7MCY6 615 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 HOXA11P31270 313 aaPredicted RBP23.01■■□□□ 1.27
TPM1-232ENST00000561425 PRPHP41219 470 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 PTENP60484 403 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 PCBP1Q15365 356 aaKnown RBP eCLIP23.01■■□□□ 1.274e-6■□□□□ 10.4
TPM1-232ENST00000561425 RILPL1Q5EBL4 403 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 LRRC55Q6ZSA7 311 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 SPPL3Q8TCT6 385 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 SYMPKQ92797 1274 aaKnown RBP23.01■■□□□ 1.27
TPM1-232ENST00000561425 HLA-CQ95604 372 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 NFKBIZQ9BYH8 718 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 AGPAT5Q9NUQ2 364 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 TYW1Q9NV66 732 aaKnown RBP23.01■■□□□ 1.27
TPM1-232ENST00000561425 SMC3Q9UQE7 1217 aa23.01■■□□□ 1.27
TPM1-232ENST00000561425 NLRC5Q86WI3 1866 aa23■■□□□ 1.27
TPM1-232ENST00000561425 ITGB1P05556 798 aa23■■□□□ 1.27
TPM1-232ENST00000561425 SRGAP2CP0DJJ0 459 aa23■■□□□ 1.27
TPM1-232ENST00000561425 BMP1P13497 986 aa23■■□□□ 1.27
TPM1-232ENST00000561425 PHKA2P46019 1235 aa23■■□□□ 1.27
TPM1-232ENST00000561425 IL17AQ16552 155 aa23■■□□□ 1.27
TPM1-232ENST00000561425 TIGD5Q53EQ6 642 aa23■■□□□ 1.27
TPM1-232ENST00000561425 CLLU1OSQ5K130 101 aa23■■□□□ 1.27
TPM1-232ENST00000561425 KLHL23Q8NBE8 558 aa23■■□□□ 1.27
TPM1-232ENST00000561425 RNF149Q8NC42 400 aa23■■□□□ 1.27
TPM1-232ENST00000561425 ERMNQ8TAM6 284 aa23■■□□□ 1.27
TPM1-232ENST00000561425 BMP2KQ9NSY1 1161 aaPredicted RBP23■■□□□ 1.27
TPM1-232ENST00000561425 REV3LO60673 3130 aa22.99■■□□□ 1.27
TPM1-232ENST00000561425 TFF2Q03403 129 aa22.99■■□□□ 1.27
TPM1-232ENST00000561425 SKIV2LQ15477 1246 aaKnown RBP22.99■■□□□ 1.27
TPM1-232ENST00000561425 ECM1Q16610 540 aa22.99■■□□□ 1.27
TPM1-232ENST00000561425 CATSPER4Q7RTX7 472 aa22.99■■□□□ 1.27
TPM1-232ENST00000561425 RSPH1Q8WYR4 309 aa22.99■■□□□ 1.27
TPM1-232ENST00000561425 NSUN3Q9H649 340 aaKnown RBP22.99■■□□□ 1.27
TPM1-232ENST00000561425 STK24Q9Y6E0 443 aa22.99■■□□□ 1.27
TPM1-232ENST00000561425 FNDC1Q4ZHG4 1894 aaPredicted RBP22.98■■□□□ 1.27
TPM1-232ENST00000561425 SPTBN5Q9NRC6 3674 aaKnown RBP22.98■■□□□ 1.27
TPM1-232ENST00000561425 SKIP12755 728 aa22.98■■□□□ 1.27
TPM1-232ENST00000561425 GLRA2P23416 452 aa22.98■■□□□ 1.27
TPM1-232ENST00000561425 DNAJB1P25685 340 aa22.98■■□□□ 1.27
TPM1-232ENST00000561425 AAK1Q2M2I8 961 aa22.98■■□□□ 1.27
TPM1-232ENST00000561425 MRPL10Q7Z7H8 261 aaKnown RBP22.98■■□□□ 1.27
TPM1-232ENST00000561425 ASAP3Q8TDY4 903 aa22.98■■□□□ 1.27
TPM1-232ENST00000561425 ALG13Q9NP73 1137 aaKnown RBP22.98■■□□□ 1.27
TPM1-232ENST00000561425 FAM105AQ9NUU6 356 aa22.98■■□□□ 1.27
TPM1-232ENST00000561425 LRWD1Q9UFC0 647 aa22.98■■□□□ 1.27
TPM1-232ENST00000561425 PIN4Q9Y237 131 aaKnown RBP22.98■■□□□ 1.27
TPM1-232ENST00000561425 ARID2Q68CP9 1835 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 RAB27AP51159 221 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 ATP2C1P98194 919 aaPredicted RBP22.97■■□□□ 1.27
TPM1-232ENST00000561425 CAPSQ13938 189 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 TCEAL5Q5H9L2 206 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 UBXN11Q5T124 520 aa22.97■■□□□ 1.27
TPM1-232ENST00000561425 LARP1BQ659C4 914 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms