RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 COL4A3BPQ9Y5P4 624 aa10.04□□□□□ -0.8
SNRPA1-214ENST00000560987 LAMA3Q16787 3333 aa10.04□□□□□ -0.8
SNRPA1-214ENST00000560987 LOXHD1Q8IVV2 1947 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 IGKV6-21A0A0C4DH24 114 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 CA3P07451 260 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 STAG3L1P0CL83 205 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 ZSCAN22P10073 491 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 DARSP14868 501 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 MUTP22033 750 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 NCBP1Q09161 790 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 TFDP1Q14186 410 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 MXD4Q14582 209 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 STK38Q15208 465 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 ECM1Q16610 540 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 PADI6Q6TGC4 694 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 CATSPER4Q7RTX7 472 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 RTN4RL1Q86UN2 441 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 CABP7Q86V35 215 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 ZNF410Q86VK4 478 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 FAM228AQ86W67 206 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 LINC01465Q8N7H1 131 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 RNF149Q8NC42 400 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 RNF169Q8NCN4 708 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 MAFAQ8NHW3 353 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 MYLIPQ8WY64 445 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 TOP1MTQ969P6 601 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 GAS2L1Q99501 681 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 TANC1Q9C0D5 1861 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 BHMT2Q9H2M3 363 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 CERS4Q9HA82 394 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 POLD4Q9HCU8 107 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 ERVK-5Q9HDB9 667 aa10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 YBX2Q9Y2T7 364 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-214ENST00000560987 E9PMD0 336 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 GJB5O95377 273 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 SFPQP23246 707 aaKnown RBP eCLIP10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 LONP1P36776 959 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 PHKA2P46019 1235 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 DHX8Q14562 1220 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 SPECC1Q5M775 1068 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 MCPH1Q8NEM0 835 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 IFT74Q96LB3 600 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 AK8Q96MA6 479 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 NT5C3AQ9H0P0 336 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 POLR3FQ9H1D9 316 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 TTYH1Q9H313 450 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 RGS18Q9NS28 235 aa10.02□□□□□ -0.81
SNRPA1-214ENST00000560987 LRRIQ4A6NIV6 560 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 INO80B-WBP1J3KQ70 363 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 ERLIN2O94905 339 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 EYA4O95677 639 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 LIG1P18858 919 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 CYP11B2P19099 503 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 IGFBP4P22692 258 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 TIE1P35590 1138 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 GRIN2CQ14957 1233 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 SPOUT1Q5T280 376 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 TWF2Q6IBS0 349 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 SLC24A5Q71RS6 500 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 SRGAP1Q7Z6B7 1085 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 ARNTL2Q8WYA1 636 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 SYMPKQ92797 1274 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 KIF12Q96FN5 646 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 USP28Q96RU2 1077 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 CSRNP2Q9H175 543 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 TMX1Q9H3N1 280 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 PRDM12Q9H4Q4 367 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 GPRC5CQ9NQ84 441 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 C1orf112Q9NSG2 853 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 DACT1Q9NYF0 836 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 CCDC39Q9UFE4 941 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 MTUS1Q9ULD2 1270 aa10.01□□□□□ -0.81
SNRPA1-214ENST00000560987 LCHNA4D1U4 455 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 MGEA5O60502 916 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 F13A1P00488 732 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 KRT18P05783 430 aaKnown RBP10□□□□□ -0.81
SNRPA1-214ENST00000560987 NCLP19338 710 aaKnown RBP10□□□□□ -0.81
SNRPA1-214ENST00000560987 GLRA2P23416 452 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 ARL2P36404 184 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 TXLNAP40222 546 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 SARSP49591 514 aaKnown RBP10□□□□□ -0.81
SNRPA1-214ENST00000560987 GRIN1Q05586 938 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 BTG3Q14201 252 aaPredicted RBP10□□□□□ -0.81
SNRPA1-214ENST00000560987 SLC39A14Q15043 492 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 PTPAQ15257 358 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 PAN2Q504Q3 1202 aaKnown RBP10□□□□□ -0.81
SNRPA1-214ENST00000560987 FAM43BQ6ZT52 329 aaPredicted RBP10□□□□□ -0.81
SNRPA1-214ENST00000560987 NPAS4Q8IUM7 802 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 FIBCD1Q8N539 461 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 DEPTORQ8TB45 409 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 CLIC6Q96NY7 704 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 MMTAG2Q9BU76 263 aaKnown RBP10□□□□□ -0.81
SNRPA1-214ENST00000560987 IFT122Q9HBG6 1241 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 XPNPEP1Q9NQW7 623 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 CHST12Q9NRB3 414 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 CFAP45Q9UL16 551 aa10□□□□□ -0.81
SNRPA1-214ENST00000560987 PIN4Q9Y237 131 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms