RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 CACNB2Q08289 660 aaPredicted RBP12.43□□□□□ -0.42
SNX1-212ENST00000560861 DMP1Q13316 513 aaPredicted RBP12.43□□□□□ -0.42
SNX1-212ENST00000560861 DGKDQ16760 1214 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 IER5Q5VY09 327 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 STXBP4Q6ZWJ1 553 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 TAS1R3Q7RTX0 852 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 FILIP1Q7Z7B0 1213 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 MAP4K3Q8IVH8 894 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 VSTM4Q8IW00 320 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 C12orf56Q8IXR9 622 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 TRAPPC12Q8WVT3 735 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 SLC7A3Q8WY07 619 aa12.43□□□□□ -0.42
SNX1-212ENST00000560861 CNOT6LQ96LI5 555 aaKnown RBP12.43□□□□□ -0.42
SNX1-212ENST00000560861 TUT1Q9H6E5 874 aaKnown RBP12.43□□□□□ -0.42
SNX1-212ENST00000560861 TRIP12Q14669 1992 aaPredicted RBP12.42□□□□□ -0.42
SNX1-212ENST00000560861 TEX33O43247 280 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 FKTNO75072 461 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 SERPINC1P01008 464 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 NR3C1P04150 777 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 CDK11BP21127 795 aaKnown RBP12.42□□□□□ -0.42
SNX1-212ENST00000560861 NAMPTP43490 491 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 LBX1P52954 281 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 MCCD1P59942 119 aaPredicted RBP12.42□□□□□ -0.42
SNX1-212ENST00000560861 TBC1D8BQ0IIM8 1120 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 CAPSQ13938 189 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 MYBPC2Q14324 1141 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 MIIPQ5JXC2 388 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 MARCH8Q5T0T0 291 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 SLC9A9Q8IVB4 645 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 FAM114A1Q8IWE2 563 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 EXOC8Q8IYI6 725 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 ZNF296Q8WUU4 475 aaPredicted RBP12.42□□□□□ -0.42
SNX1-212ENST00000560861 BORCS6Q96GS4 357 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 ERO1AQ96HE7 468 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 ACCSQ96QU6 501 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 CTAGE1Q96RT6 745 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 KIFC3Q9BVG8 833 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 GBP3Q9H0R5 595 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 TAB2Q9NYJ8 693 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 ZNF215Q9UL58 517 aaPredicted RBP12.42□□□□□ -0.42
SNX1-212ENST00000560861 TBX20Q9UMR3 447 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 TRPC6Q9Y210 931 aa12.42□□□□□ -0.42
SNX1-212ENST00000560861 MYADML2A6NDP7 307 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 LGALS16A8MUM7 142 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 SEPT4O43236 478 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
SNX1-212ENST00000560861 ADCY3O60266 1144 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 ADAMTS4O75173 837 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 FGFR1OPO95684 399 aaKnown RBP12.41□□□□□ -0.42
SNX1-212ENST00000560861 PIGRP01833 764 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 ELNP15502 786 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 SCP2P22307 547 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 HOXD10P28358 340 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 HOXC8P31273 242 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 SMTNP53814 917 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
SNX1-212ENST00000560861 ADAM17P78536 824 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 MAP2K1Q02750 393 aaPredicted RBP12.41□□□□□ -0.42
SNX1-212ENST00000560861 TBX2Q13207 712 aaPredicted RBP12.41□□□□□ -0.42
SNX1-212ENST00000560861 PPP2R5AQ15172 486 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 CDCA2Q69YH5 1023 aaPredicted RBP12.41□□□□□ -0.42
SNX1-212ENST00000560861 SLC39A4Q6P5W5 647 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 TRIM59Q8IWR1 403 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 GOLGA5Q8TBA6 731 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 PXYLP1Q8TE99 480 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 EEF2KMTQ96G04 330 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 JPH2Q9BR39 696 aaPredicted RBP12.41□□□□□ -0.42
SNX1-212ENST00000560861 AP5M1Q9H0R1 490 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 TMEM206Q9H813 350 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 KMT5AQ9NQR1 393 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 CGNQ9P2M7 1197 aaKnown RBP12.41□□□□□ -0.42
SNX1-212ENST00000560861 KCNG1Q9UIX4 513 aa12.41□□□□□ -0.42
SNX1-212ENST00000560861 DENND3A2RUS2 1198 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 TISP43B9A030 160 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 H0YCG3 227 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 CETN3O15182 167 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 SLC16A3O15427 465 aaKnown RBP12.4□□□□□ -0.42
SNX1-212ENST00000560861 MAGEB2O15479 319 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 GNA14O95837 355 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 HMGCRP04035 888 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 EDN1P05305 212 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
SNX1-212ENST00000560861 NR2F2P24468 414 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 CCND3P30281 292 aaPredicted RBP12.4□□□□□ -0.42
SNX1-212ENST00000560861 CASP4P49662 377 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 CPT1AP50416 773 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 PRMT2P55345 433 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 BEX3Q00994 111 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 PPFIA1Q13136 1202 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 ADAM9Q13443 819 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 HIC1Q14526 733 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 FSCN1Q16658 493 aaKnown RBP12.4□□□□□ -0.42
SNX1-212ENST00000560861 HS1BP3Q53T59 392 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
SNX1-212ENST00000560861 LRRC71Q8N4P6 559 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 TCP11Q8WWU5 503 aa12.4□□□□□ -0.42
SNX1-212ENST00000560861 PRPF31Q8WWY3 499 aaKnown RBP12.4□□□□□ -0.42
SNX1-212ENST00000560861 ZBTB10Q96DT7 871 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms