RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SLC24A5Q71RS6 500 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 IFNLR1Q8IU57 520 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 NPAS4Q8IUM7 802 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 RNF149Q8NC42 400 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 MYLIPQ8WY64 445 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 AK8Q96MA6 479 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 SCLT1Q96NL6 688 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 BHMT2Q9H2M3 363 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 PRDM12Q9H4Q4 367 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 C1orf112Q9NSG2 853 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 STXBP5LQ9Y2K9 1186 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 COL6A3P12111 3177 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 ARHGEF35A5YM69 484 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 EYA4O95677 639 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 HSP90AA1P07900 732 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 LINC00271P0C7V0 271 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 PDIA4P13667 645 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 ERVK-21P61565 698 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 CAPSQ13938 189 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 MXD4Q14582 209 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 TMEM119Q4V9L6 283 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 SRGAP1Q7Z6B7 1085 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 MCPH1Q8NEM0 835 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 LRRC15Q8TF66 581 aa16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 CCDC43Q96MW1 224 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 INO80BQ9C086 356 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 POLR3FQ9H1D9 316 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 FBXO2Q9UK22 296 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-213ENST00000560856 DENND3A2RUS2 1198 aa16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 ZSCAN22P10073 491 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 HOXA11P31270 313 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 LONP1P36776 959 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 NASPP49321 788 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 SLC39A14Q15043 492 aa16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 MAEAQ7L5Y9 396 aa16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 BSNDQ8WZ55 320 aa16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 YME1L1Q96TA2 773 aa16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 CERS4Q9HA82 394 aa16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 RNF19AQ9NV58 838 aa16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 DNM3Q9UQ16 869 aa16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 SRPRBQ9Y5M8 271 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-213ENST00000560856 TRANK1O15050 2925 aa16.96■□□□□ 0.3
SNRPA1-213ENST00000560856 RFXAPO00287 272 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 SLC26A4O43511 780 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 ATF7P17544 494 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 SFPQP23246 707 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 MARCKSP29966 332 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 GATMP50440 423 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 FOXD4L5Q5VV16 416 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 C1orf186Q6ZWK4 172 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 USP49Q70CQ1 688 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 CATSPER4Q7RTX7 472 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 ZNF598Q86UK7 904 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 CABP7Q86V35 215 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 KCTD17Q8N5Z5 321 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 FOXD4L4Q8WXT5 416 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 PLIN2Q99541 437 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 TRAIPQ9BWF2 469 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 NFKBIZQ9BYH8 718 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 ELAC1Q9H777 363 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 POLD4Q9HCU8 107 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 CHST12Q9NRB3 414 aa16.95■□□□□ 0.3
SNRPA1-213ENST00000560856 A0A0U1RQF3 1178 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 LPXNO60711 386 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 F13A1P00488 732 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 STAG3L1P0CL83 205 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 ZSCAN20P17040 1043 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 PHKA2P46019 1235 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 MBTD1Q05BQ5 628 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 AMHR2Q16671 573 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 FAM102BQ5T8I3 360 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 RINT1Q6NUQ1 792 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 ECHDC2Q86YB7 292 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 DAW1Q8N136 415 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 LINC00301Q8NCQ3 95 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 ARNTL2Q8WYA1 636 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 CLIC6Q96NY7 704 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 RUSC1Q9BVN2 902 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 CCSER1Q9C0I3 900 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 CSRNP2Q9H175 543 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 TMEM161AQ9NX61 479 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 TFIP11Q9UBB9 837 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 PCDHB7Q9Y5E2 793 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 ADGRA3Q8IWK6 1321 aa16.94■□□□□ 0.3
SNRPA1-213ENST00000560856 UBA7P41226 1012 aa16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 SLC12A3P55017 1021 aa16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 MAPK7Q13164 816 aa16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 TFDP1Q14186 410 aa16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 CDCA2Q69YH5 1023 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 CMTR2Q8IYT2 770 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 SYT2Q8N9I0 419 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 CLP1Q92989 425 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-213ENST00000560856 EPSTI1Q96J88 318 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms