RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 THNSL1Q8IYQ7 743 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 MCPH1Q8NEM0 835 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 MLXIPLQ9NP71 852 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 HDAC6Q9UBN7 1215 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 ZFYVE16Q7Z3T8 1539 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.25
SYNM-203ENST00000560674 KNOP1Q1ED39 458 aaKnown RBP13.49□□□□□ -0.25
SYNM-203ENST00000560674 C11orf70Q9BRQ4 267 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 SLITRK6Q9H5Y7 841 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 GTSE1Q9NYZ3 720 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 ARFIP2P53365 341 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 AP2B1P63010 937 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 PPP1R18Q6NYC8 613 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 PADI6Q6TGC4 694 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 TMEM270Q6UE05 265 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 SH3RF3Q8TEJ3 882 aaPredicted RBP13.49□□□□□ -0.25
SYNM-203ENST00000560674 BTBD6Q96KE9 485 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 TTC7AQ9ULT0 858 aaPredicted RBP13.49□□□□□ -0.25
SYNM-203ENST00000560674 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 UBN2Q6ZU65 1347 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 TTC26A0AVF1 554 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 MARK3P27448 753 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 KIAA1841Q6NSI8 718 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 DCTN4Q9UJW0 460 aa13.49□□□□□ -0.25
SYNM-203ENST00000560674 CFAP73A6NFT4 308 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 E2F6O75461 281 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 PDHA1P08559 390 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 HABP4Q5JVS0 413 aaKnown RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 PDLIM2Q96JY6 352 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 TMEM47Q9BQJ4 181 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 HEY1Q9Y5J3 304 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 MORC2Q9Y6X9 1032 aaPredicted RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 CDC42BPAQ5VT25 1732 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 UBE4BO95155 1302 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 CLDN3O15551 220 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 TEX33O43247 280 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 SUSD4Q5VX71 490 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 GRAMD4Q6IC98 578 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 ANGPTL8Q6UXH0 198 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 MIGA2Q7L4E1 593 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 PARP9Q8IXQ6 854 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 RNF217Q8TC41 542 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 INTS2Q9H0H0 1204 aaKnown RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 ING2Q9H160 280 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 LY9Q9HBG7 655 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 WARS2Q9UGM6 360 aaKnown RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 CCDC195A0A1B0GUA6 201 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 TARSL2A2RTX5 802 aaKnown RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 DRP2Q13474 957 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 MTMR1Q13613 665 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 MORF4L2Q15014 288 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 SNF8Q96H20 258 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 DONSONQ9NYP3 566 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 CYP2D6P10635 497 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 CIITAP33076 1130 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 EP400NLQ6ZTU2 488 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 PPM1NQ8N819 430 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 FAM20AQ96MK3 541 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 YIPF3Q9GZM5 350 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 COA1Q9GZY4 146 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 WNT8AQ9H1J5 351 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 ANKARQ7Z5J8 1434 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 SMARCA1P28370 1054 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 DRAP1Q14919 205 aaPredicted RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 TMED8Q6PL24 325 aaPredicted RBP13.48□□□□□ -0.25
SYNM-203ENST00000560674 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 ETNK1Q9HBU6 452 aa13.48□□□□□ -0.25
SYNM-203ENST00000560674 EFCAB6Q5THR3 1501 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 CREB3O43889 395 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 SNX2O60749 519 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 FSD1LQ9BXM9 530 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 IP6K2Q9UHH9 426 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 ERBB3P21860 1342 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 IQGAP3Q86VI3 1631 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 SYCE1LA8MT33 242 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 VAMP7P51809 220 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 ACTN3Q08043 901 aaPredicted RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 TXNRD1Q16881 649 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 KRT27Q7Z3Y8 459 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 ALKBH8Q96BT7 664 aaKnown RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 GCOM2Q9BZD3 368 aaPredicted RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 EPC1Q9H2F5 836 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 SNX5Q9Y5X3 404 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 NLRP1Q9C000 1473 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 GGPS1O95749 300 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 ATP1A1P05023 1023 aaKnown RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
SYNM-203ENST00000560674 MYBL1P10243 752 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 TNFAIP2Q03169 654 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 NSUN2Q08J23 767 aaKnown RBP eCLIP13.47□□□□□ -0.25
SYNM-203ENST00000560674 SEMA3FQ13275 785 aa13.47□□□□□ -0.25
SYNM-203ENST00000560674 ENAHQ8N8S7 591 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms