RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 LIMD1Q9UGP4 676 aa11.87□□□□□ -0.51
CDC42BPB-207ENST00000560492 C2orf71A6NGG8 1288 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 ZBTB42B2RXF5 422 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 FAM86B1E9PN63 330 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 STK25O00506 426 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 SNPHO15079 494 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 CHMP2AO43633 222 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 CLASP2O75122 1294 aaKnown RBP11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 FAM86B2P0C5J1 330 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 ATP4AP20648 1035 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 EIF4BP23588 611 aaKnown RBP11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 BCAR1P56945 870 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 FAM189BP81408 668 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 SETQ01105 290 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 RNASELQ05823 741 aaKnown RBP11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 KCNC3Q14003 757 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 DSC3Q14574 896 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 PRR16Q569H4 304 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 ATAT1Q5SQI0 421 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 RNF20Q5VTR2 975 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 ZNF746Q6NUN9 644 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 SGMS1Q86VZ5 419 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 VPS52Q8N1B4 723 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 MRPL43Q8N983 215 aaKnown RBP11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 GBP3Q9H0R5 595 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 FBXL21Q9UKT6 434 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 INPP5FQ9Y2H2 1132 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 PCDHA10Q9Y5I2 948 aa11.86□□□□□ -0.51
CDC42BPB-207ENST00000560492 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 PRR23AA6NEV1 266 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 TBC1D8BQ0IIM8 1120 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 CLLU1OSQ5K130 101 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 TWF2Q6IBS0 349 aaKnown RBP11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 KANK3Q6NY19 840 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 TMC5Q6UXY8 1006 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 FRMD5Q7Z6J6 570 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 CABP7Q86V35 215 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 SLC39A11Q8N1S5 342 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 ACSF2Q96CM8 615 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 LSG1Q9H089 658 aaKnown RBP11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 C6orf50Q9HD87 102 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 NRBP2Q9NSY0 501 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 RNF19AQ9NV58 838 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 MAFBQ9Y5Q3 323 aaPredicted RBP11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 C2orf16Q68DN1 1984 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 DENND4AQ7Z401 1863 aa11.85□□□□□ -0.51
CDC42BPB-207ENST00000560492 CACNA1HO95180 2353 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 DHX15O43143 795 aaKnown RBP11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 CSDE1O75534 798 aaKnown RBP11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 EOMESO95936 686 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 OATP04181 439 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 SSBP05455 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 EPCAMP16422 314 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 FOXK2Q01167 660 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 PRKCEQ02156 737 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 KIAA1841Q6NSI8 718 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 TEX2Q8IWB9 1127 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 REXO1Q8N1G1 1221 aaKnown RBP11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 KCNG4Q8TDN1 519 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 CCDC12Q8WUD4 166 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 MARVELD3Q96A59 401 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 ESYT1Q9BSJ8 1104 aa11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
CDC42BPB-207ENST00000560492 PTPRZ1P23471 2315 aaPredicted RBP11.83□□□□□ -0.51
CDC42BPB-207ENST00000560492 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 A0A0U1RQF3 1178 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 PROB1E7EW31 1015 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 GAS7O60861 476 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 DARSP14868 501 aaKnown RBP11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 NBL1P41271 181 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 CLK2P49760 499 aaKnown RBP11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 GPC3P51654 580 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 AKAP17AQ02040 695 aaKnown RBP11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 MTERF2Q49AM1 385 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 GLB1LQ6UWU2 654 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 ZDHHC14Q8IZN3 488 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 ADSSL1Q8N142 457 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 LPPQ93052 612 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 GCOM2Q9BZD3 368 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 ZBP1Q9H171 429 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 ADAMTS10Q9H324 1103 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 DISC1Q9NRI5 854 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
CDC42BPB-207ENST00000560492 CYP3A4P08684 503 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 SFPQP23246 707 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 KLRC2P26717 231 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 DNM2P50570 870 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms