RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 GRIN1Q05586 938 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 ZRSR1Q15695 479 aaKnown RBP15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 RAB30Q15771 203 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 KLHL40Q2TBA0 621 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 RNF149Q8NC42 400 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 TMEM40Q8WWA1 233 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 LARP4BQ92615 738 aaKnown RBP15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 IFT74Q96LB3 600 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 SPATA32Q96LK8 384 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 NLRP4Q96MN2 994 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 FDXACB1Q9BRP7 624 aaPredicted RBP15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 C2orf40Q9H1Z8 148 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 TSPYL2Q9H2G4 693 aaPredicted RBP15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 AGO3Q9H9G7 860 aaKnown RBP15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 IFT122Q9HBG6 1241 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 DACT1Q9NYF0 836 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 ODF2LQ9ULJ1 636 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 PRPF40AO75400 957 aaKnown RBP15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 PLA2G4BP0C869 781 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 ZSCAN20P17040 1043 aaPredicted RBP15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 PLCG1P19174 1290 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 AXLP30530 894 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 ABCD1P33897 745 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 ME1P48163 572 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 SLC12A3P55017 1021 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 PTENP60484 403 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 NCBP1Q09161 790 aaKnown RBP15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 NFX1Q12986 1120 aaKnown RBP15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 RRAGBQ5VZM2 374 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 RINT1Q6NUQ1 792 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 C1orf186Q6ZWK4 172 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 FAM228AQ86W67 206 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 TMEM87AQ8NBN3 555 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 EPSTI1Q96J88 318 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 PRIMPOLQ96LW4 560 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 CLIC6Q96NY7 704 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 TRAIPQ9BWF2 469 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 LRRC27Q9C0I9 530 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 POLR3FQ9H1D9 316 aaPredicted RBP15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 MAGEF1Q9HAY2 307 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 FAM13BQ9NYF5 915 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 CXXC1Q9P0U4 656 aaPredicted RBP15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 ST3GAL5Q9UNP4 418 aa15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 NOC2LQ9Y3T9 749 aaKnown RBP15.49■□□□□ 0.07
PKNOX1-209ENST00000560448 SKIP12755 728 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 NCLP19338 710 aaKnown RBP15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 GLRA2P23416 452 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 KARSQ15046 597 aaKnown RBP15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 FAM102BQ5T8I3 360 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 ADALQ6DHV7 355 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 ZBTB8OSQ8IWT0 167 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 RAD54LQ92698 747 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 CDHR5Q9HBB8 845 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 RGS18Q9NS28 235 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 LARSQ9P2J5 1176 aaKnown RBP15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 RANBP2P49792 3224 aaKnown RBP15.48■□□□□ 0.07
PKNOX1-209ENST00000560448 DENND3A2RUS2 1198 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 H0YCG3 227 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 STAG3L1P0CL83 205 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 EFNA5P52803 228 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 DMP1Q13316 513 aaPredicted RBP15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 CAPSQ13938 189 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 CSPP1Q1MSJ5 1256 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 AXDND1Q5T1B0 1012 aaPredicted RBP15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 CDCA2Q69YH5 1023 aaPredicted RBP15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 SLC24A5Q71RS6 500 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 KCNK18Q7Z418 384 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 HERC6Q8IVU3 1022 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 KCNN1Q92952 543 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 TOP1MTQ969P6 601 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 CCDC51Q96ER9 411 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 ELAC1Q9H777 363 aaKnown RBP15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 BLOC1S4Q9NUP1 217 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 PCDH10Q9P2E7 1040 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 MSRAQ9UJ68 235 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 PCDHA7Q9UN72 937 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 COL4A6Q14031 1691 aa15.47■□□□□ 0.07
PKNOX1-209ENST00000560448 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 ENPP3O14638 875 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 ERLIN2O94905 339 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 GJB5O95377 273 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 SRGAP2CP0DJJ0 459 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 STAT6P42226 847 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 FAM187BQ17R55 369 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 FOXD4L6Q3SYB3 417 aaPredicted RBP15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 FAM109BQ6ICB4 259 aaPredicted RBP15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 FOXD4L3Q6VB84 417 aaPredicted RBP15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 IQUBQ8NA54 791 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 SLC17A8Q8NDX2 589 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 GPT2Q8TD30 523 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 LEO1Q8WVC0 666 aaPredicted RBP15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 PPP1R16BQ96T49 567 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 NTPCRQ9BSD7 190 aaKnown RBP15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 AGPAT5Q9NUQ2 364 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 PRMT7Q9NVM4 692 aaPredicted RBP15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 INSL6Q9Y581 213 aa15.46■□□□□ 0.07
PKNOX1-209ENST00000560448 TRIOBPQ9H2D6 2365 aa15.45■□□□□ 0.06
PKNOX1-209ENST00000560448 A0A087WWV3 80 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms