RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SLC24A5Q71RS6 500 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 TPH2Q8IWU9 490 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 FAM178BQ8IXR5 827 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 CEP170P1Q96L14 293 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 PPP1R16BQ96T49 567 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 LRFN2Q9ULH4 789 aa16.96■□□□□ 0.31
SNRPA1-210ENST00000560383 MYO7AQ13402 2215 aa16.96■□□□□ 0.3
SNRPA1-210ENST00000560383 PLXNA4Q9HCM2 1894 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 DENND3A2RUS2 1198 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 POTEMA6NI47 508 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 C9IYK1 514 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 ZBTB39O15060 712 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 MGEA5O60502 916 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 DSC3Q14574 896 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 ZNF410Q86VK4 478 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 SLC7A3Q8WY07 619 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 ANKEF1Q9NU02 776 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 PLAGL2Q9UPG8 496 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 SMC3Q9UQE7 1217 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 PCDHB7Q9Y5E2 793 aa16.95■□□□□ 0.3
SNRPA1-210ENST00000560383 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 SPATA31C1P0DKV0 1188 aa16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 XRCC6P12956 609 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 FAM189BP81408 668 aa16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 PAN2Q504Q3 1202 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 PPP2R3CQ969Q6 453 aa16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 ADAM2Q99965 735 aa16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 ELAC1Q9H777 363 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 CLDND1Q9NY35 253 aa16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 PRKAG3Q9UGI9 489 aa16.94■□□□□ 0.3
SNRPA1-210ENST00000560383 H3BQ06 376 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 ITGB1P05556 798 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 IL9P15248 144 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 TECP42680 631 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 POLGP54098 1239 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 HYAL1Q12794 435 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 CAMK1Q14012 370 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 NBR1Q14596 966 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 XKR9Q5GH70 373 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 CATSPER3Q86XQ3 398 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 GJD3Q8N144 294 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 POLR3CQ9BUI4 534 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 GCOM2Q9BZD3 368 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 TUFT1Q9NNX1 390 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 ALG13Q9NP73 1137 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 TMEM161AQ9NX61 479 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 PCDHB6Q9Y5E3 794 aa16.93■□□□□ 0.3
SNRPA1-210ENST00000560383 LAD1O00515 517 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 RPA1P27694 616 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 LTBRP36941 435 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 RARRES1P49788 294 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 UBE3AQ05086 875 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 PDIA5Q14554 519 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 EMC2Q15006 297 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 CSPP1Q1MSJ5 1256 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 RHPN2Q8IUC4 686 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 KLHL23Q8NBE8 558 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 SPPL3Q8TCT6 385 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 NLRP7Q8WX94 980 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 ZNF668Q96K58 619 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 IFT122Q9HBG6 1241 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 CD320Q9NPF0 282 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 XPNPEP1Q9NQW7 623 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 AAASQ9NRG9 546 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 COL4A3BPQ9Y5P4 624 aa16.92■□□□□ 0.3
SNRPA1-210ENST00000560383 A0A087WZ62 844 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 PI4K2BG5E9Z4 385 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 H3BQV1 296 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 MED24O75448 989 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 DGAT1O75907 488 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 MUTP22033 750 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 DNAJB1P25685 340 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 PRPHP41219 470 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 GATMP50440 423 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 PTGDRQ13258 359 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 KSR1Q8IVT5 923 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 IGSF22Q8N9C0 903 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 ERMNQ8TAM6 284 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 PRPF31Q8WWY3 499 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 PSPC1Q8WXF1 523 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 TMEM143Q96AN5 459 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 SCLT1Q96NL6 688 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 FDXACB1Q9BRP7 624 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 INO80BQ9C086 356 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 EPHX3Q9H6B9 360 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 DBR1Q9UK59 544 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 PCDHB12Q9Y5F1 795 aa16.91■□□□□ 0.3
SNRPA1-210ENST00000560383 FSD2A1L4K1 749 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 ASAP2O43150 1006 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 HOXA2O43364 376 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 GPR37L1O60883 481 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
SNRPA1-210ENST00000560383 FERMT3Q86UX7 667 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms