RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 hCG_1642624A0A1W2PR95 340 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 FAM189BP81408 668 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 NBR1Q14596 966 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 MCTP1Q6DN14 999 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 ASTLQ6HA08 431 aaPredicted RBP23.07■■□□□ 1.28
PSEN1-225ENST00000560005 KCNT2Q6UVM3 1135 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 LRRC55Q6ZSA7 311 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 FAM228AQ86W67 206 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 NKD2Q969F2 451 aaPredicted RBP23.07■■□□□ 1.28
PSEN1-225ENST00000560005 OSMRQ99650 979 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 TMEM117Q9H0C3 514 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 ADAM7Q9H2U9 754 aa23.07■■□□□ 1.28
PSEN1-225ENST00000560005 ASGR2P07307 311 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 ARP10275 920 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 SLC26A2P50443 739 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 KRT85P78386 507 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 FUT2Q10981 343 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 ITGB3BPQ13352 177 aaPredicted RBP23.06■■□□□ 1.28
PSEN1-225ENST00000560005 KIZQ2M2Z5 673 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 ERMP1Q7Z2K6 904 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 BRAPQ7Z569 592 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 ZNF558Q96NG5 402 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 MFSD1Q9H3U5 465 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 ELAC1Q9H777 363 aaKnown RBP23.06■■□□□ 1.28
PSEN1-225ENST00000560005 CFAP45Q9UL16 551 aa23.06■■□□□ 1.28
PSEN1-225ENST00000560005 HBP1O60381 514 aa23.05■■□□□ 1.28
PSEN1-225ENST00000560005 WEE2P0C1S8 567 aa23.05■■□□□ 1.28
PSEN1-225ENST00000560005 PPM1AP35813 382 aa23.05■■□□□ 1.28
PSEN1-225ENST00000560005 KRT17Q04695 432 aa23.05■■□□□ 1.28
PSEN1-225ENST00000560005 ITIH3Q06033 890 aa23.05■■□□□ 1.28
PSEN1-225ENST00000560005 ZNF396Q96N95 335 aaPredicted RBP23.05■■□□□ 1.28
PSEN1-225ENST00000560005 CASD1Q96PB1 797 aa23.05■■□□□ 1.28
PSEN1-225ENST00000560005 V9GY48 417 aaPredicted RBP23.05■■□□□ 1.28
PSEN1-225ENST00000560005 MYH15Q9Y2K3 1946 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 BACH1O14867 736 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 ATG7O95352 703 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 NCLP19338 710 aaKnown RBP23.04■■□□□ 1.28
PSEN1-225ENST00000560005 ID4P47928 161 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 CRYBB1P53674 252 aaPredicted RBP23.04■■□□□ 1.28
PSEN1-225ENST00000560005 RESTQ13127 1097 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 DSC3Q14574 896 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 SMC1AQ14683 1233 aaKnown RBP23.04■■□□□ 1.28
PSEN1-225ENST00000560005 MCTP2Q6DN12 878 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 ADSSL1Q8N142 457 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 LRRC43Q8N309 656 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 SCAND2PQ9GZW5 306 aaPredicted RBP23.04■■□□□ 1.28
PSEN1-225ENST00000560005 AGO4Q9HCK5 861 aaKnown RBP23.04■■□□□ 1.28
PSEN1-225ENST00000560005 RNF19AQ9NV58 838 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 EVPLQ92817 2033 aa23.04■■□□□ 1.28
PSEN1-225ENST00000560005 ZNF292O60281 2723 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 COL1A2P08123 1366 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 IGKV6D-21A0A0A0MT36 114 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 CCNE2O96020 404 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 MTHFRP42898 656 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 GNL2Q13823 731 aaKnown RBP23.03■■□□□ 1.28
PSEN1-225ENST00000560005 HEATR3Q7Z4Q2 680 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 FERMT3Q86UX7 667 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 ABI1Q8IZP0 508 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 CCDC82Q8N4S0 544 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 MRPL43Q8N983 215 aaKnown RBP23.03■■□□□ 1.28
PSEN1-225ENST00000560005 TDRD5Q8NAT2 981 aaKnown RBP23.03■■□□□ 1.28
PSEN1-225ENST00000560005 PGBD1Q96JS3 809 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 SH3GLB2Q9NR46 395 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 SPG21Q9NZD8 308 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 LIMD1Q9UGP4 676 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 CNTNAP5Q8WYK1 1306 aa23.03■■□□□ 1.28
PSEN1-225ENST00000560005 C2orf71A6NGG8 1288 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 ZBTB42B2RXF5 422 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 DDX39AO00148 427 aaKnown RBP23.02■■□□□ 1.28
PSEN1-225ENST00000560005 HOXA2O43364 376 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 DTNBO60941 627 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 CLASP2O75122 1294 aaKnown RBP23.02■■□□□ 1.28
PSEN1-225ENST00000560005 CA8P35219 290 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 CLCN5P51795 746 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 CEP55Q53EZ4 464 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 ZNF484Q5JVG2 852 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 RARS2Q5T160 578 aaKnown RBP23.02■■□□□ 1.28
PSEN1-225ENST00000560005 FAM160B1Q5W0V3 765 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 CCDC60Q8IWA6 550 aaPredicted RBP23.02■■□□□ 1.28
PSEN1-225ENST00000560005 C12orf76Q8N812 135 aaPredicted RBP23.02■■□□□ 1.28
PSEN1-225ENST00000560005 TMEM87AQ8NBN3 555 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 BRMS1Q9HCU9 246 aa23.02■■□□□ 1.28
PSEN1-225ENST00000560005 VTNP04004 478 aa23.01■■□□□ 1.27
PSEN1-225ENST00000560005 PFKFB3Q16875 520 aaPredicted RBP23.01■■□□□ 1.27
PSEN1-225ENST00000560005 PDXDC2PQ6P474 469 aa23.01■■□□□ 1.27
PSEN1-225ENST00000560005 ABHD15Q6UXT9 468 aa23.01■■□□□ 1.27
PSEN1-225ENST00000560005 ZDHHC14Q8IZN3 488 aa23.01■■□□□ 1.27
PSEN1-225ENST00000560005 FLCNQ8NFG4 579 aa23.01■■□□□ 1.27
PSEN1-225ENST00000560005 hCG_1984214I3L0E3 225 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 GPR32O75388 356 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 C22orf31O95567 290 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 CWF19L1Q69YN2 538 aaKnown RBP23■■□□□ 1.27
PSEN1-225ENST00000560005 KANK3Q6NY19 840 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 SLC39A11Q8N1S5 342 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 METTL13Q8N6R0 699 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 ZNF713Q8N859 430 aaPredicted RBP23■■□□□ 1.27
PSEN1-225ENST00000560005 RNF169Q8NCN4 708 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 CCDC12Q8WUD4 166 aaPredicted RBP23■■□□□ 1.27
PSEN1-225ENST00000560005 ZNF302Q9NR11 478 aa23■■□□□ 1.27
PSEN1-225ENST00000560005 DBR1Q9UK59 544 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms