RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 LRRC31Q6UY01 552 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 C8orf58Q8NAV2 365 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 P2RX5Q93086 422 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 PCDH11XQ9BZA7 1347 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 PCDH11YQ9BZA8 1340 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 NAALADL2Q58DX5 795 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 MKRN3Q13064 507 aaKnown RBP14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 FAM47AQ5JRC9 791 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 FAM173BQ6P4H8 233 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 POTEAQ6S8J7 498 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 CDH24Q86UP0 819 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 NFATC2IPQ8NCF5 419 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 C19orf18Q8NEA5 215 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 SCFD1Q8WVM8 642 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 YIPF2Q9BWQ6 316 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 IARS2Q9NSE4 1012 aaKnown RBP14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 STON1Q9Y6Q2 735 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 PDZK1P1A8MUH7 402 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 INO80B-WBP1J3KQ70 363 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 STRNO43815 780 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 FOSP01100 380 aaPredicted RBP14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 HMOX2P30519 316 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 NLRP11P59045 1033 aaKnown RBP14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 ALCAMQ13740 583 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 INO80BQ9C086 356 aaPredicted RBP14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 MEFVO15553 781 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 HSPA9P38646 679 aaKnown RBP14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 HNRNPH2P55795 449 aaKnown RBP14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 INPP5DQ92835 1189 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 FAM227BQ96M60 508 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 ASNSD1Q9NWL6 643 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 UBAP1LF5GYI3 381 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 ALDH1B1P30837 517 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 PTGDRQ13258 359 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 SNTNA6NMZ2 147 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 SPDYAQ5MJ70 313 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 DDHD1Q8NEL9 900 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 PLBD2Q8NHP8 589 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 AFF4Q9UHB7 1163 aaKnown RBP14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 H7C0S8 307 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 GNPATO15228 680 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 CDC37Q16543 378 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 FAM47EQ6ZV65 393 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 KIRREL3Q8IZU9 778 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 ZNF713Q8N859 430 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 SH3TC2Q8TF17 1288 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 CASP10Q92851 521 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 NXF1Q9UBU9 619 aaKnown RBP14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 KCNA3P22001 575 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 KRT78Q8N1N4 520 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 PSD3Q9NYI0 1048 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 TIMM10P62072 90 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 RNF135Q8IUD6 432 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 ACAP3Q96P50 834 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 CARD9Q9H257 536 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 THAP9Q9H5L6 903 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 VIPAS39Q9H9C1 493 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 RWDD2AQ9UIY3 292 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 CAPN1P07384 714 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 HPCAP84074 193 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 RFX8Q6ZV50 586 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 PANX2Q96RD6 677 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 SLC13A1Q9BZW2 595 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 ETNK1Q9HBU6 452 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 DTNAQ9Y4J8 743 aa14.69□□□□□ -0.06
CSPG4P12-202ENST00000559989 ACEP12821 1306 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 CHRNA2Q15822 529 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 TMEM154Q6P9G4 183 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 TMC5Q6UXY8 1006 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 RHPN2Q8IUC4 686 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 KRT6AP02538 564 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 KRT6BP04259 564 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 KRT6CP48668 564 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 ATXN3P54252 364 aaPredicted RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 CSE1LP55060 971 aaKnown RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 MAGOHP61326 146 aaKnown RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 COX10Q12887 443 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 CERKLQ49MI3 558 aaPredicted RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 USP39Q53GS9 565 aaKnown RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 FASTKD1Q53R41 847 aaKnown RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 DSTYKQ6XUX3 929 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 USP40Q9NVE5 1235 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 PPP6R2O75170 966 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 DNAL1Q4LDG9 190 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 EME1Q96AY2 570 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 EXOSC4Q9NPD3 245 aaKnown RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 SGSM2O43147 1006 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 PCP11498 1178 aaKnown RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 NCKAP1LP55160 1127 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 C11orf88Q6PI97 169 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 DYRK4Q9NR20 520 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 APOA4P06727 396 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 TRIM49P0CI25 452 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 TRIM49CP0CI26 452 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 OSBPP22059 807 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 CLCN6P51797 869 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 ACTN3Q08043 901 aaPredicted RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 EAPPQ56P03 285 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms