RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 UBA1P22314 1058 aaKnown RBP19.51■□□□□ 0.71
SNX1-208ENST00000559844 CCND3P30281 292 aaPredicted RBP19.51■□□□□ 0.71
SNX1-208ENST00000559844 SP2Q02086 613 aa19.51■□□□□ 0.71
SNX1-208ENST00000559844 TMEM63BQ5T3F8 832 aa19.51■□□□□ 0.71
SNX1-208ENST00000559844 CCDC62Q6P9F0 684 aa19.51■□□□□ 0.71
SNX1-208ENST00000559844 ANKRD7Q92527 254 aa19.51■□□□□ 0.71
SNX1-208ENST00000559844 DDX41Q9UJV9 622 aaKnown RBP19.51■□□□□ 0.71
SNX1-208ENST00000559844 SLC16A3O15427 465 aaKnown RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 ADCY6O43306 1168 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 SORBS3O60504 671 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 IPO7O95373 1038 aaKnown RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 KCNA2P16389 499 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 SFNP31947 248 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 JAK3P52333 1124 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 NFIL3Q16649 462 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 IQSEC1Q6DN90 963 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 WDR24Q96S15 920 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 NUCKS1Q9H1E3 243 aaKnown RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 METTL14Q9HCE5 456 aaKnown RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 FAM207AQ9NSI2 230 aaPredicted RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 PLAGL2Q9UPG8 496 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 AKR1A1P14550 325 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 SMPD1P17405 629 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 HOXD13P35453 343 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 QARSP47897 775 aaKnown RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 KRT76Q01546 638 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 TNFAIP2Q03169 654 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 NCBP1Q09161 790 aaKnown RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 GJC2Q5T442 439 aaPredicted RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 ZNF662Q6ZS27 426 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 COPS5Q92905 334 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 NHEJ1Q9H9Q4 299 aaPredicted RBP19.5■□□□□ 0.71
SNX1-208ENST00000559844 SAMM50Q9Y512 469 aa19.5■□□□□ 0.71
SNX1-208ENST00000559844 EIF3CLB5ME19 914 aaKnown RBP19.49■□□□□ 0.71
SNX1-208ENST00000559844 ZBTB39O15060 712 aa19.49■□□□□ 0.71
SNX1-208ENST00000559844 FAM178BQ8IXR5 827 aa19.49■□□□□ 0.71
SNX1-208ENST00000559844 ZNF710Q8N1W2 664 aa19.49■□□□□ 0.71
SNX1-208ENST00000559844 RDM1Q8NG50 284 aa19.49■□□□□ 0.71
SNX1-208ENST00000559844 LENG1Q96BZ8 264 aaPredicted RBP19.49■□□□□ 0.71
SNX1-208ENST00000559844 EIF3CQ99613 913 aaKnown RBP19.49■□□□□ 0.71
SNX1-208ENST00000559844 SENP7Q9BQF6 1050 aa19.49■□□□□ 0.71
SNX1-208ENST00000559844 HAUS4Q9H6D7 363 aa19.49■□□□□ 0.71
SNX1-208ENST00000559844 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
SNX1-208ENST00000559844 ARMCX3Q9UH62 379 aaPredicted RBP19.49■□□□□ 0.71
SNX1-208ENST00000559844 FRMPD3Q5JV73 1810 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 FANCGO15287 622 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 SEPT4O43236 478 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 GGPS1O95749 300 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 NR3C1P04150 777 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 KCNMA1Q12791 1236 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 TUBB2AQ13885 445 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 NEDD9Q14511 834 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 DUSP28Q4G0W2 176 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 CACNA2D4Q7Z3S7 1137 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 TUBB2BQ9BVA1 445 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 TIPINQ9BVW5 301 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 HMX1Q9NP08 348 aaPredicted RBP19.48■□□□□ 0.71
SNX1-208ENST00000559844 CEP72Q9P209 647 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 PCDHB13Q9Y5F0 798 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 WDR81Q562E7 1941 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 SFI1A8K8P3 1242 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 MYCP01106 439 aaPredicted RBP19.48■□□□□ 0.71
SNX1-208ENST00000559844 EPB41P11171 864 aaKnown RBP19.48■□□□□ 0.71
SNX1-208ENST00000559844 PADI6Q6TGC4 694 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 CYFIP1Q7L576 1253 aa19.48■□□□□ 0.71
SNX1-208ENST00000559844 REXO2Q9Y3B8 237 aaKnown RBP19.48■□□□□ 0.71
SNX1-208ENST00000559844 WDR64B1ANS9 1081 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 MAPTP10636 758 aaKnown RBP19.47■□□□□ 0.71
SNX1-208ENST00000559844 NMT1P30419 496 aaKnown RBP19.47■□□□□ 0.71
SNX1-208ENST00000559844 ARHGAP25P42331 645 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 SP4Q02446 784 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 ALCAMQ13740 583 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 ZNF569Q5MCW4 686 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 ODR4Q5SWX8 454 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 ZNF720Q7Z2F6 126 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 DHX37Q8IY37 1157 aaKnown RBP19.47■□□□□ 0.71
SNX1-208ENST00000559844 C4orf19Q8IY42 314 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 MNS1Q8NEH6 495 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 MLXIPQ9HAP2 919 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 JPH1Q9HDC5 661 aaPredicted RBP19.47■□□□□ 0.71
SNX1-208ENST00000559844 NFASCO94856 1347 aa19.47■□□□□ 0.71
SNX1-208ENST00000559844 EPHB6O15197 1021 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 RRP9O43818 475 aaKnown RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 HIP1RO75146 1068 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 FARP2O94887 1054 aaPredicted RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 GH1P01241 217 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 PSMC5P62195 406 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 CELF3Q5SZQ8 465 aaKnown RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 PDXDC1Q6P996 788 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 GOLGA5Q8TBA6 731 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 BAP1Q92560 729 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 SYN2Q92777 582 aaPredicted RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 CCDC42Q96M95 316 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 CCDC43Q96MW1 224 aaKnown RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 GNEQ9Y223 722 aaKnown RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 AFPP02771 609 aaKnown RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 KCNH2Q12809 1159 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 ZNF746Q6NUN9 644 aaPredicted RBP19.46■□□□□ 0.71
SNX1-208ENST00000559844 METTL7BQ6UX53 244 aa19.46■□□□□ 0.71
SNX1-208ENST00000559844 RRAGAQ7L523 313 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms