RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 EXTL1Q92935 676 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 ZNF503Q96F45 646 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 TMEM176AQ96HP8 235 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 FEZ1Q99689 392 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 PITHD1Q9GZP4 211 aaPredicted RBP5.38□□□□□ -1.55
SPG11-218ENST00000559754 HAPLN2Q9GZV7 340 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 CSRNP2Q9H175 543 aa5.38□□□□□ -1.55
SPG11-218ENST00000559754 USP36Q9P275 1121 aaKnown RBP5.38□□□□□ -1.55
SPG11-218ENST00000559754 A0A0A6YYJ9 748 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 C2orf78A6NCI8 922 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 APOL3O95236 402 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 VSIG10L2P0DP72 767 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 KPNA1P52294 538 aaPredicted RBP5.37□□□□□ -1.55
SPG11-218ENST00000559754 DSG1Q02413 1049 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 PTH1RQ03431 593 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 KRT40Q6A162 431 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 CLEC14AQ86T13 490 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 HIST1H2AHQ96KK5 128 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 RPL10LQ96L21 214 aaKnown RBP5.37□□□□□ -1.55
SPG11-218ENST00000559754 SORCS2Q96PQ0 1159 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 HIST1H2AJQ99878 128 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 MYL10Q9BUA6 226 aa5.37□□□□□ -1.55
SPG11-218ENST00000559754 SCAND2PQ9GZW5 306 aaPredicted RBP5.37□□□□□ -1.55
SPG11-218ENST00000559754 C14orf93Q9H972 538 aaKnown RBP5.37□□□□□ -1.55
SPG11-218ENST00000559754 AGO3Q9H9G7 860 aaKnown RBP5.37□□□□□ -1.55
SPG11-218ENST00000559754 FSBPO95073 299 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 JUNP05412 331 aaKnown RBP5.36□□□□□ -1.55
SPG11-218ENST00000559754 STAT3P40763 770 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 SCNN1BP51168 640 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 SAFB2Q14151 953 aaKnown RBP eCLIP5.36□□□□□ -1.55
SPG11-218ENST00000559754 C21orf62-AS1Q17RA5 79 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 TKFCQ3LXA3 575 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 TAF7LQ5H9L4 462 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 GPR158Q5T848 1215 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 NXPE1Q8N323 547 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 CHTF18Q8WVB6 975 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 RTF1Q92541 710 aaKnown RBP5.36□□□□□ -1.55
SPG11-218ENST00000559754 TCF25Q9BQ70 676 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 OSBPL6Q9BZF3 934 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 MTFR1LQ9H019 292 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 POFUT1Q9H488 388 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 MTG2Q9H4K7 406 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.36□□□□□ -1.55
SPG11-218ENST00000559754 THG1LQ9NWX6 298 aaKnown RBP5.36□□□□□ -1.55
SPG11-218ENST00000559754 DNAI1Q9UI46 699 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 RCAN3Q9UKA8 241 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 HS3ST3A1Q9Y663 406 aa5.36□□□□□ -1.55
SPG11-218ENST00000559754 ST20-MTHFSA0A0A6YYL1 179 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 ZNF891A8MT65 544 aaPredicted RBP5.35□□□□□ -1.55
SPG11-218ENST00000559754 NPIPB8E9PQR5 432 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 OPHN1O60890 802 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 SMAD3P84022 425 aaKnown RBP5.35□□□□□ -1.55
SPG11-218ENST00000559754 CRHR2Q13324 411 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 LSM12Q3MHD2 195 aaKnown RBP5.35□□□□□ -1.55
SPG11-218ENST00000559754 MFSD5Q6N075 450 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 FAM111BQ6SJ93 734 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 ESPNLQ6ZVH7 1005 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 GAREM2Q75VX8 874 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 OR2W6PQ8NHA6 318 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 IL17DQ8TAD2 202 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 MIEF2Q96C03 454 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 MFSD3Q96ES6 412 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 PLEKHG4BQ96PX9 1271 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 GPHA2Q96T91 129 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 NOL10Q9BSC4 688 aaKnown RBP5.35□□□□□ -1.55
SPG11-218ENST00000559754 ZNF703Q9H7S9 590 aaPredicted RBP5.35□□□□□ -1.55
SPG11-218ENST00000559754 ZMAT4Q9H898 229 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 IL23AQ9NPF7 189 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 PARPBPQ9NWS1 579 aa5.35□□□□□ -1.55
SPG11-218ENST00000559754 H2AFY2Q9P0M6 372 aaPredicted RBP5.35□□□□□ -1.55
SPG11-218ENST00000559754 MRPL42Q9Y6G3 142 aaKnown RBP5.35□□□□□ -1.55
SPG11-218ENST00000559754 UBE2QL1A1L167 161 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 MTSS1O43312 755 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 TOX4O94842 621 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 LSP1P33241 339 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 MCM7P33993 719 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 KIR2DL3P43628 341 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 HMGA2P52926 109 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 ADAM8P78325 824 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 PHC1P78364 1004 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 ABHD18Q0P651 414 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 ZNF662Q6ZS27 426 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 C11orf74Q86VG3 221 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 TMPRSS6Q8IU80 811 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 ZFPM1Q8IX07 1006 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 DHX37Q8IY37 1157 aaKnown RBP5.34□□□□□ -1.55
SPG11-218ENST00000559754 GSPT2Q8IYD1 628 aaKnown RBP5.34□□□□□ -1.55
SPG11-218ENST00000559754 CDYL2Q8N8U2 506 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 FERMT2Q96AC1 680 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 UIMC1Q96RL1 719 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 SH3BP1Q9Y3L3 701 aa5.34□□□□□ -1.55
SPG11-218ENST00000559754 MYPNQ86TC9 1320 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 FAM83GA6ND36 823 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 PLSCR1O15162 318 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 ZNF202O95125 648 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 HNRNPLP14866 589 aaKnown RBP eCLIP5.33□□□□□ -1.562e-6■□□□□ 8.3
SPG11-218ENST00000559754 CDK11BP21127 795 aaKnown RBP5.33□□□□□ -1.56
SPG11-218ENST00000559754 LSSP48449 732 aa5.33□□□□□ -1.56
SPG11-218ENST00000559754 TUBA3CQ13748 450 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms