RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 DNERQ8NFT8 737 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 REEP2Q9BRK0 252 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 MAK16Q9BXY0 300 aaKnown RBP11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 SNX25Q9H3E2 840 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 UBE2TQ9NPD8 197 aaPredicted RBP11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 MYO1EQ12965 1108 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 EFCAB12Q6NXP0 572 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 SCARA5Q6ZMJ2 495 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 METTL16Q86W50 562 aaKnown RBP11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 EFCAB13Q8IY85 973 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 GUF1Q8N442 669 aaKnown RBP11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 MICAL1Q8TDZ2 1067 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 CABS1Q96KC9 395 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 CAPS2Q9BXY5 557 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.57
CARMIL3-202ENST00000559694 CAPN9O14815 690 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 DAPK3O43293 454 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 RNF40O75150 1001 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 EARS2Q5JPH6 523 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 DSTYKQ6XUX3 929 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 INTS8Q75QN2 995 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 METTL23Q86XA0 190 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 TSGA10Q9BZW7 698 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 THAP9Q9H5L6 903 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 PIN4Q9Y237 131 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 SPDYE16A6NNV3 312 aaPredicted RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 EFNA5P52803 228 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 PGM5Q15124 567 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 LY6KQ17RY6 165 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 NAALADL2Q58DX5 795 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 TYW1Q9NV66 732 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 COL18A1P39060 1754 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 BPIFB4P59827 614 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 MXD4Q14582 209 aaPredicted RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 EMC2Q15006 297 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 ARMCX2Q7L311 632 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 SECISBP2LQ93073 1101 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 SELENOSQ9BQE4 189 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 ABHD16BQ9H3Z7 469 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 LTBP3Q9NS15 1303 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 A0A087WUV0 522 aaPredicted RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 PRKCBP05771 671 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 ST3GAL1Q11201 340 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 CCDC51Q96ER9 411 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 KIAA1586Q9HCI6 787 aa11.51□□□□□ -0.57
CARMIL3-202ENST00000559694 C5P01031 1676 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 SP3Q02447 781 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 KRT31Q15323 416 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 ZNF394Q53GI3 561 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 IER5Q5VY09 327 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 TTC19Q6DKK2 380 aaPredicted RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 RIOX2Q8IUF8 465 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 ABCB6Q9NP58 842 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 PITPNM2Q9BZ72 1349 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 CICQ96RK0 1608 aaPredicted RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 DOT1LQ8TEK3 1739 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 SMIM23A6NLE4 172 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 MAGEA9P43362 315 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 ALDH5A1P51649 535 aaPredicted RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 ATN1P54259 1190 aaPredicted RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 CASP8Q14790 479 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 TCP11X2Q5H9J9 407 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 MOXD1Q6UVY6 613 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 VSTM4Q8IW00 320 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 CCDC155Q8N6L0 562 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 FAM149B1Q96BN6 582 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 AGO2Q9UKV8 859 aaKnown RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 OATP04181 439 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 NLRP11P59045 1033 aaKnown RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 BFSP1Q12934 665 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 STK4Q13043 487 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 ZNF667Q5HYK9 610 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 UBLCP1Q8WVY7 318 aaPredicted RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 NSRP1Q9H0G5 558 aaKnown RBP11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 ODF2LQ9ULJ1 636 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 ARFGEF2Q9Y6D5 1785 aa11.5□□□□□ -0.57
CARMIL3-202ENST00000559694 ZMYND10O75800 440 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 FGRP09769 529 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 H2AFZP0C0S5 128 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 NSFP46459 744 aaKnown RBP11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 PTPAQ15257 358 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 SCYL2Q6P3W7 929 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 H2AFVQ71UI9 128 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 IFT20Q8IY31 132 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 RDM1Q8NG50 284 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 ANKEF1Q9NU02 776 aa11.49□□□□□ -0.57
CARMIL3-202ENST00000559694 ADAMTS7Q9UKP4 1686 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms